saving work before adding uq stuff

MultClassPipe3.py

@@ -61,8 +61,8 @@ from imblearn.combine import SMOTEENN
 from imblearn.under_sampling import EditedNearestNeighbours
 
 #%%
-# rs = {'random_state': 42}
+rs = {'random_state': 42}
-# njobs = {'n_jobs': 10}
+njobs = {'n_jobs': 10}
 
 scoring_fn =  ({ 'fscore'       : make_scorer(f1_score)
                   , 'mcc'        : make_scorer(matthews_corrcoef)

MultClassPipe3_CALL.py

@@ -8,6 +8,7 @@ Created on Tue Mar 15 11:09:50 2022
 #%% Data
 X = all_df_wtgt[numerical_FN+categorical_FN]
 y = all_df_wtgt['mutation_class']
+#y = all_df_wtgt['dst_mode']
 #%% variables
 
 #%% MultClassPipeSKFCV: function call()
@@ -21,3 +22,4 @@ mm_skf_scores_df_all = pd.DataFrame(mm_skf_scoresD)
 mm_skf_scores_df_all
 mm_skf_scores_df_test = mm_skf_scores_df_all.filter(like='test_', axis=0)
 mm_skf_scores_df_train = mm_skf_scores_df_all.filter(like='train_', axis=0) # helps to see if you trust the results
+]

imports.py

@@ -99,7 +99,6 @@ from MultClassPipe2 import MultClassPipeline2
 from loopity_loop import MultClassPipeSKFLoop
 from MultClassPipe3 import MultClassPipeSKFCV
 
-
 gene = 'pncA'
 drug = 'pyrazinamide'