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4609757efb
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added appendix tables script
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2022-08-13 21:19:19 +01:00 |
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d984d283c5
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generated embb lineage plots
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2022-08-13 21:18:01 +01:00 |
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c8f3ddf892
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colour changes
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2022-08-13 15:49:24 +01:00 |
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c6a720770d
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some stuff
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2022-08-13 15:47:41 +01:00 |
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365c322953
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added fd corrected p-values for ks stats
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2022-08-13 14:54:51 +01:00 |
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f5f1e388c3
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modified ks test to output all stats needed in one script
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2022-08-12 14:35:03 +01:00 |
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22be845e1f
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added ggpairs code
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2022-08-12 10:04:35 +01:00 |
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318941e91b
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older file renamed for prominent effects
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2022-08-11 21:09:48 +01:00 |
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d6766d9d9c
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added plotting_colnames.R in scripts/plotting
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2022-08-11 21:08:54 +01:00 |
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1b08080078
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added prominent_effects.R
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2022-08-11 21:07:55 +01:00 |
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b32398d16f
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output corr plots with log10 labels
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2022-08-11 21:03:27 +01:00 |
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3d3e74306c
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added log10 to corr plot labels
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2022-08-11 21:01:16 +01:00 |
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b302daaa60
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rearranged corr plot cols and also added example for ggpairs
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2022-08-11 20:56:34 +01:00 |
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fdb3f00503
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added dist_mutation_to_na2.pl script from UQ to calculate dist to na
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2022-08-11 10:09:33 +01:00 |
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e714034678
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commented out test code
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2022-08-10 20:03:40 +01:00 |
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842efe4409
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created prominent effect calcualtions
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2022-08-10 20:02:43 +01:00 |
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3af11ec3d3
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wideP_consurf3
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2022-08-10 14:08:43 +01:00 |
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0bcbb44ae5
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addded old script to redundant
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2022-08-10 14:08:23 +01:00 |
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ccc7dd7bf2
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added csv for all colnames
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2022-08-10 14:08:23 +01:00 |
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2f7558a883
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aadded colnames to plot as names
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2022-08-10 14:08:23 +01:00 |
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4315adc556
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wideP_consurf3
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2022-08-10 14:07:11 +01:00 |
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f6a3b7f066
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added lineage plots in one
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2022-08-10 12:58:58 +01:00 |
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285b28b1d6
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various plots
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2022-08-10 11:06:13 +01:00 |
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a6d93b3fa8
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starting corr plots
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2022-08-09 21:55:24 +01:00 |
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cd86fcf8e8
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added separate scripts for layout for convinience
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2022-08-09 21:47:24 +01:00 |
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d78b072732
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comment out run
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2022-08-09 20:00:42 +01:00 |
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5ef9eb8826
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saving
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2022-08-09 19:58:32 +01:00 |
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faf9ab9707
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various
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2022-08-09 19:56:47 +01:00 |
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af03fc6fd6
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various
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2022-08-09 19:56:17 +01:00 |
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415d05ab6e
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various stuff
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2022-08-09 19:42:29 +01:00 |
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5cbaef3d36
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various heat-bar/position tile faff
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2022-08-09 19:42:29 +01:00 |
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94454d6fba
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added combined lineage plot
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2022-08-09 19:34:07 +01:00 |
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fe292e3717
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fix: add NULL for aa_pos_lig[123] for configs that don't have them
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2022-08-09 13:51:05 +01:00 |
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79d83b6240
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various changes
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2022-08-09 13:46:05 +01:00 |
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4ce2087224
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various changes
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2022-08-08 16:48:53 +01:00 |
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5bdfd03443
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refactored dm om plots and generated the final layout
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2022-08-08 16:46:27 +01:00 |
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28510471f0
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consurf tile fixes
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2022-08-08 15:37:28 +01:00 |
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0234a8f77b
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more plot modifications dm and om plots mainly
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2022-08-08 15:32:16 +01:00 |
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4e6f10d1ba
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added outcome col to dm_om data
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2022-08-07 11:21:25 +01:00 |
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54b3dd9d42
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various refactoring
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2022-08-06 18:49:00 +01:00 |
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c968089cd2
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refactoring logo plots to add flame bar
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2022-08-06 18:48:12 +01:00 |
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f0a9eb4eec
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aadded complete obs count for corr plots and added placeholder for mcsm-na
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2022-08-06 14:31:18 +01:00 |
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f194b5ea4f
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added corr plot TODO for lineage counts
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2022-08-06 13:30:41 +01:00 |
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0e777108a9
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saving and strating to write
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2022-08-06 13:09:26 +01:00 |
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569e372476
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agenerated corr plots with MAF and provean
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2022-08-06 13:08:42 +01:00 |
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1a513913ce
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reflected the factor thing as been added as new additon
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2022-08-05 20:00:04 +01:00 |
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fe9c3f8afe
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added dm_om_plots.R
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2022-08-05 19:59:07 +01:00 |
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ae8bc8ae85
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added as.factor in unpired stats
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2022-08-05 19:58:31 +01:00 |
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9c955cddc0
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still playing
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2022-08-05 18:49:26 +01:00 |
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92fba43dc1
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mods
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2022-08-05 18:32:23 +01:00 |
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