|
|
74c4dd878c
|
adde asthma and severity analysis dir
|
2020-12-08 04:04:11 +00:00 |
|
|
|
3338de800a
|
added and moved plot_data for non-asthmatics and non-severe analysis
|
2020-12-07 16:55:17 +00:00 |
|
|
|
c3b1ba9a0e
|
added boxplots with stats for non-severe analysis
|
2020-12-07 16:52:34 +00:00 |
|
|
|
dde2cc9494
|
checked and tidy up scripts for plots for non-severe
|
2020-12-07 16:51:16 +00:00 |
|
|
|
f2b778ace7
|
moved non-asthmatics analysis to non_asthmatics/
|
2020-11-30 12:15:11 +00:00 |
|
|
|
6731b9484c
|
added check_stats.R for non-severe analysis
|
2020-11-30 12:06:55 +00:00 |
|
|
|
37f8cd619e
|
added stats for non_severe flu stats in resp dir
|
2020-11-27 18:22:00 +00:00 |
|
|
|
47a03c2639
|
saving work
|
2020-11-27 18:21:35 +00:00 |
|
|
|
a43f323ed8
|
reflected new filename in source scripts!
|
2020-11-27 17:53:40 +00:00 |
|
|
|
3a380a5be1
|
renamed file to reflect data_extraction_mediator
|
2020-11-27 17:47:05 +00:00 |
|
|
|
52a2453327
|
saving work
|
2020-11-24 18:53:02 +00:00 |
|
|
|
f0c0fd72d1
|
perfomed LR analysis and tidyed up clinical formatting code
|
2020-11-24 18:48:52 +00:00 |
|
|
|
08e01abfb5
|
correcting dtype for sfluv and h1n1v for data formatting clinical
|
2020-11-24 13:48:53 +00:00 |
|
|
|
7529549bfc
|
added obesity and asthma as covariates with t1_resp score as outcome
|
2020-11-23 18:31:19 +00:00 |
|
|
|
9158866dda
|
added regression for meds with death outcome
|
2020-11-23 18:24:30 +00:00 |
|
|
|
4800f804e4
|
moved non-asthmatics scripts back
|
2020-11-23 18:18:32 +00:00 |
|
|
|
a53243a19c
|
moved older regression files to extra
|
2020-11-23 18:17:08 +00:00 |
|
|
|
e3259f2f17
|
logistic regression for outcome and meds
|
2020-11-23 18:16:19 +00:00 |
|
|
|
25fb702e2e
|
added boxplots for non-asthmatics i.e wq boxplot_linear_na.R boxplot_log_na.R
|
2020-11-20 13:16:53 +00:00 |
|
|
|
e71a2ccd40
|
added plot_data_na.R for plotting non-asthmatics fp adults
|
2020-11-20 13:15:49 +00:00 |
|
|
|
3b6776af24
|
saving work
|
2020-11-20 13:14:10 +00:00 |
|
|
|
0d591c46f5
|
added non asthmatics stats for sam and serum flu_stats_unpaired_na_sam.R and flu_stats_unpaired_na_serum.R
|
2020-11-20 12:38:10 +00:00 |
|
|
|
1562a09631
|
added quick summary to see sig meds just before writing file
|
2020-11-20 12:36:55 +00:00 |
|
|
|
17aebc26e8
|
added non asthmatics analysis data_extraction_formatting_non_asthmatics.R and flu_stats_unpaired_na_npa.R
|
2020-11-20 11:43:56 +00:00 |
|
|
|
b72c4df796
|
reformatting code to select needed df for analysis
|
2020-11-20 11:43:03 +00:00 |
|
|
|
a6cbaab40a
|
added flu_stats_fisher_only.R containing separate dfs based on var factor levels
|
2020-11-19 18:05:57 +00:00 |
|
|
|
74769b9a38
|
cleaninig code
|
2020-11-19 18:04:59 +00:00 |
|
|
|
269918d696
|
separated fisher test only and renamed logistic_outcome col
|
2020-11-19 17:48:08 +00:00 |
|
|
|
6e999898df
|
stats for categ vars using chisq and fisher
|
2020-11-19 15:40:02 +00:00 |
|
|
|
46575c657f
|
saving
|
2020-11-19 15:39:18 +00:00 |
|
|
|
c5529206d9
|
added steroid_ics data for merging with clinical data for completion
|
2020-11-18 16:35:10 +00:00 |
|
|
|
702ff4e327
|
renamed reg_cols_extraction.R to colnames_clinical_meds.R
|
2020-11-18 16:11:35 +00:00 |
|
|
|
66f49a0eed
|
added extra/
|
2020-11-18 16:04:30 +00:00 |
|
|
|
76dc3fbb6b
|
added data_extraction_formatting_regression.R flu_stats_unpaired_clinical.R and reg_cols_extraction.R
|
2020-11-18 16:01:29 +00:00 |
|
|
|
bb6e92fa0f
|
separated clinical data processing from reg
|
2020-11-18 16:00:26 +00:00 |
|
|
|
9dbad32504
|
added checks for fp adults in read_data.R
|
2020-11-18 13:08:39 +00:00 |
|
|
|
07de043cab
|
updated read_data.R to return fp_adults as well
|
2020-11-18 13:06:36 +00:00 |
|
|
|
12eee6923a
|
added checks.R
|
2020-11-17 17:31:22 +00:00 |
|
|
|
4766d6d450
|
added clinical data extraction and logistic regression script
|
2020-11-17 17:30:05 +00:00 |
|
|
|
05f1f716f1
|
updated Header_TT.R with reg libs
|
2020-11-17 17:29:24 +00:00 |
|
|
|
ba3c4564ea
|
ran quick stats checks with wf data
|
2020-11-02 18:31:29 +00:00 |
|
|
|
f14c7ca64b
|
outputting svg for plots with stats
|
2020-11-02 17:20:38 +00:00 |
|
|
|
b94d9a3fdb
|
renamed file to reflect stats for linear graphs
|
2020-11-02 16:39:37 +00:00 |
|
|
|
abf615baeb
|
removed boxplot_function as try error handle sit now!
|
2020-11-02 16:37:44 +00:00 |
|
|
|
a4d305d44b
|
added TASK at the beginning of the scripts
|
2020-11-02 16:36:52 +00:00 |
|
|
|
8033c1785f
|
added try catch for error handling
|
2020-11-02 16:26:22 +00:00 |
|
|
|
9c141326aa
|
enter the commit message for your changes. Lines starting
|
2020-11-02 15:04:40 +00:00 |
|
|
|
b8ff7995ac
|
added boxplot_stat_log.R to generate graphs with log data and stats
|
2020-11-02 14:28:52 +00:00 |
|
|
|
550e8b2c50
|
renamed file
|
2020-11-02 12:06:46 +00:00 |
|
|
|
9fc9a5852b
|
renamed file
|
2020-11-02 12:05:55 +00:00 |
|
