Commit graph

856 commits

Author SHA1 Message Date
ccc7dd7bf2 added csv for all colnames 2022-08-10 14:08:23 +01:00
2f7558a883 aadded colnames to plot as names 2022-08-10 14:08:23 +01:00
4315adc556 wideP_consurf3 2022-08-10 14:07:11 +01:00
f6a3b7f066 added lineage plots in one 2022-08-10 12:58:58 +01:00
285b28b1d6 various plots 2022-08-10 11:06:13 +01:00
a6d93b3fa8 starting corr plots 2022-08-09 21:55:24 +01:00
cd86fcf8e8 added separate scripts for layout for convinience 2022-08-09 21:47:24 +01:00
d78b072732 comment out run 2022-08-09 20:00:42 +01:00
5ef9eb8826 saving 2022-08-09 19:58:32 +01:00
faf9ab9707 various 2022-08-09 19:56:47 +01:00
af03fc6fd6 various 2022-08-09 19:56:17 +01:00
415d05ab6e various stuff 2022-08-09 19:42:29 +01:00
5cbaef3d36 various heat-bar/position tile faff 2022-08-09 19:42:29 +01:00
94454d6fba added combined lineage plot 2022-08-09 19:34:07 +01:00
fe292e3717 fix: add NULL for aa_pos_lig[123] for configs that don't have them 2022-08-09 13:51:05 +01:00
79d83b6240 various changes 2022-08-09 13:46:05 +01:00
4ce2087224 various changes 2022-08-08 16:48:53 +01:00
5bdfd03443 refactored dm om plots and generated the final layout 2022-08-08 16:46:27 +01:00
28510471f0 consurf tile fixes 2022-08-08 15:37:28 +01:00
0234a8f77b more plot modifications dm and om plots mainly 2022-08-08 15:32:16 +01:00
4e6f10d1ba added outcome col to dm_om data 2022-08-07 11:21:25 +01:00
54b3dd9d42 various refactoring 2022-08-06 18:49:00 +01:00
c968089cd2 refactoring logo plots to add flame bar 2022-08-06 18:48:12 +01:00
f0a9eb4eec aadded complete obs count for corr plots and added placeholder for mcsm-na 2022-08-06 14:31:18 +01:00
f194b5ea4f added corr plot TODO for lineage counts 2022-08-06 13:30:41 +01:00
0e777108a9 saving and strating to write 2022-08-06 13:09:26 +01:00
569e372476 agenerated corr plots with MAF and provean 2022-08-06 13:08:42 +01:00
1a513913ce reflected the factor thing as been added as new additon 2022-08-05 20:00:04 +01:00
fe9c3f8afe added dm_om_plots.R 2022-08-05 19:59:07 +01:00
ae8bc8ae85 added as.factor in unpired stats 2022-08-05 19:58:31 +01:00
9c955cddc0 still playing 2022-08-05 18:49:26 +01:00
92fba43dc1 mods 2022-08-05 18:32:23 +01:00
57433607bc lf_bp2: add a "monochrome" option 2022-08-05 18:28:10 +01:00
d5bc1c272e lf_bp2 2022-08-05 18:13:44 +01:00
33925dafe9 things 2022-08-05 16:13:57 +01:00
6cb9998c4c added the script to redundant 2022-08-05 14:45:33 +01:00
164113f665 moved dm_om_data.R the script version to redundant and the function version has been trimmed to for readability 2022-08-05 14:44:36 +01:00
cc27ffe82f added the rev script that i used to develop the trimmed version 2022-08-05 14:36:58 +01:00
05ab89ec09 git trimmed downthe dm_om_data.R 2022-08-05 14:36:02 +01:00
fae846395d fix 2022-08-05 12:52:51 +01:00
31148dfbdc lf_bp fuckage 2022-08-05 12:46:28 +01:00
c0f59bc9c9 breakage 2022-08-05 12:45:16 +01:00
14f8f5d6d4 generated lineage barplots and corr plots for conservation 2022-08-04 19:48:09 +01:00
424c1d184d added linage barplots 2022-08-04 19:29:20 +01:00
7f9facc1e6 moved old corr files 2022-08-04 19:28:39 +01:00
dab8294a01 renamed folder 2022-08-04 18:52:03 +01:00
ad2e538ec2 separated plotting_thesis for generating plots 2022-08-04 18:47:18 +01:00
95131abc3c consurf fixes 2022-08-04 16:48:53 +01:00
bf41d01b39 multiple script updates and bug fixes 2022-08-04 16:48:31 +01:00
599cd7493f buggy bugs that bug me 2022-08-04 15:18:23 +01:00