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a7d26412e5
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added corr data to get_plotting_dfs.R and generate corr plots
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2021-06-28 17:25:45 +01:00 |
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2993ab722a
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moved old logo plots scripts to redundant and updated running_plotting_scripts.txt to reflect these and how to run the single logo_plots.R to generate logo plots
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2021-06-24 17:45:40 +01:00 |
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8de2686401
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added logo_plots.R that now produces all logo plots while sourcing the get_plotting_df.R script
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2021-06-24 17:34:53 +01:00 |
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0e15c05d8b
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checked logo_multiple_muts.R with the new sourcing script for data
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2021-06-24 16:43:23 +01:00 |
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6bbc3328b9
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added get_plotting_dfs.R as a mother script to be sourced by all plotting scripts
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2021-06-24 14:21:34 +01:00 |
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9668452e98
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made logo_plot.R source script that pull in all the data
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2021-06-24 14:19:46 +01:00 |
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ca2315523d
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fixed cmd running script problem for logo plots
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2021-06-24 12:12:36 +01:00 |
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552c5e77aa
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added first line to all func to run from
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2021-06-24 10:02:14 +01:00 |
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48a85ede0c
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saving work on logo plots before finishing
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2021-06-23 16:49:18 +01:00 |
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9d964e84b6
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generated logo_plot.R from cmd, checked
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2021-06-23 16:35:44 +01:00 |
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8277b489d6
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changes made to combining_dfs_plotting.R
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2021-06-23 16:15:15 +01:00 |
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4f4734f565
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updated logo_plot.R with functions
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2021-06-23 12:06:41 +01:00 |
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5dec604742
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moved combining_dfs_plotting.R to function and added test script for this as well
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2021-06-22 18:15:15 +01:00 |
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754cd70a6f
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added files that were moved to redundant
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2021-06-22 18:06:08 +01:00 |
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ea79f3b3c7
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turned combining_dfs_plotting.R to a function and moved old script to redundant
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2021-06-22 18:04:10 +01:00 |
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cd5cbce3a0
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updating script to sort out proper merging for plotting
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2021-06-22 14:46:03 +01:00 |
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140bdc6d96
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added example for layout
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2021-06-14 09:06:30 +01:00 |
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6e8116bc16
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calculating af_or using function and cmd options now
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2021-06-11 15:12:08 +01:00 |
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d9e00b9a42
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minor tweak to plotting_globals.R to make gene_match a global var
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2021-06-11 11:21:20 +01:00 |
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29fa99b914
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moved functions/ in the scripts dir
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2021-06-11 11:11:39 +01:00 |
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2dc81e72f4
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moved old bp scripts to redundant
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2021-06-10 16:18:08 +01:00 |
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ff7522eca2
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moved plotting_func to functions and replaced 3 basic_barplots scripts with 1
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2021-06-10 16:09:58 +01:00 |
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b9d176afa4
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added function for position_count_bp.R
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2021-06-10 14:46:11 +01:00 |
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cbb3749a21
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added functions dir for further tidying and tested this with ind scripts for stability
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2021-06-09 18:13:18 +01:00 |
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912a439589
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moved bp function script to function/
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2021-06-09 17:08:56 +01:00 |
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826b8aa9d0
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added shiny app and turned stability bp to function
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2021-06-09 17:05:02 +01:00 |
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f871dd39cd
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saving work
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2021-06-09 16:27:05 +01:00 |
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47a6ddbf72
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repuposed and ran basic_barplots for lig and foldx including filenames
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2021-06-09 11:33:08 +01:00 |
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27d79105ef
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repurposed basic_barplots_foldx.R
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2021-06-09 11:24:50 +01:00 |
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8f73c7b804
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uddated how to run plotting scripts. This is a cleaner version to keep up-to-date
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2021-06-08 16:53:07 +01:00 |
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3f691281bc
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wrapper script basic_barplots_PS.R now takes cmd and calls functions to generate plots.Tested and verfiied.
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2021-06-08 16:48:19 +01:00 |
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1505a3c707
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tidied plotting_data.R as a function returning a lits of dfs
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2021-06-08 16:00:28 +01:00 |
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9af0249e0e
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added plotting_globals and text file with info on how to run plotting scripst
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2021-06-04 17:26:01 +01:00 |
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a5715bcccc
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tweaking baic bp to make generic
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2021-06-04 17:23:41 +01:00 |
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aaa24ca32d
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minor updates to dir.R
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2021-06-04 15:05:52 +01:00 |
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a1fef205da
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adpated combining_dfs.py and plotting.R for gid and attempting to make it generic
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2021-06-04 14:36:16 +01:00 |
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59430a49dd
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updated counts.py with wt seq counts
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2021-03-03 11:54:48 +00:00 |
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9784bc1729
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updated count.py with indel and stop codon count
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2021-02-24 09:56:36 +00:00 |
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9b0d2f6550
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saving work and generating revised_figure7
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2021-02-20 16:17:38 +00:00 |
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719f18a226
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added base histogram script for af and or
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2020-10-13 13:38:17 +01:00 |
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784199d48f
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added ns prefix to SNPs for unambiguity
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2020-10-13 13:37:22 +01:00 |
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02fae30c29
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changing labels in graphs for frontiers journal
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2020-10-09 13:10:08 +01:00 |
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e91d704929
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renamed other_plots.R to other_plots_combined.R and changing labels to capital letters for journal
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2020-10-09 12:17:24 +01:00 |
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bf3e830f64
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saving work minor changes perhaps
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2020-10-08 16:03:12 +01:00 |
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4157b8137c
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added barplot_subcolours_aa_combined.R to combine and label these plots
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2020-10-06 18:43:20 +01:00 |
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861b2a7ee1
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adjusted x axis position label for barplot_subcols_aa_LIG.R
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2020-10-06 18:42:24 +01:00 |
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4368c061c7
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generated labelled ps_plots_combined.R and capital "P" for position in barplots coloured aa for Lig
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2020-10-06 18:15:50 +01:00 |
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315f7b1e0e
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output corr plots with coloured dots
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2020-10-06 17:47:24 +01:00 |
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0cdc507ba5
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updated TASK in hist_af_or_combined.R
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2020-10-06 16:43:59 +01:00 |
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711781933c
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renamed dist_plots.R to dist_plots_check.R as its exploratory
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2020-10-06 16:39:24 +01:00 |
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