|
|
dc775a4486
|
added boxplot_stat_test.R to test boxplot_stat_function independently
|
2020-11-01 16:46:09 +00:00 |
|
|
|
c0d993b232
|
isolating function from running on data
|
2020-11-01 16:44:42 +00:00 |
|
|
|
eaa8416255
|
changed cols for groups
|
2020-10-31 20:53:44 +00:00 |
|
|
|
6375a53feb
|
rendering formatted pvalue on graph
|
2020-10-31 20:46:06 +00:00 |
|
|
|
dd54f10ad8
|
making it work with function and ggarrange to combine plots
|
2020-10-31 20:43:07 +00:00 |
|
|
|
6575fc7aba
|
updating the function
|
2020-10-31 19:52:18 +00:00 |
|
|
|
9c67a208e2
|
added annotation to the plot with annotate, still testing
|
2020-10-31 19:30:12 +00:00 |
|
|
|
558f57c61e
|
tweaking layout in test
|
2020-10-31 18:30:20 +00:00 |
|
|
|
8015dd4d6a
|
fixed colours as well
|
2020-10-30 20:56:15 +00:00 |
|
|
|
1ed09ac20b
|
nearly, adding correct y_pos to plot the stat labels
|
2020-10-30 19:48:28 +00:00 |
|
|
|
af334b559e
|
added boxplot_stat_function.R
|
2020-10-30 17:23:40 +00:00 |
|
|
|
3274d3f08b
|
testing boxplot with stats
|
2020-10-30 17:22:46 +00:00 |
|
|
|
ed10be8f6e
|
testing boxplots
|
2020-10-30 17:10:20 +00:00 |
|
|
|
8358c0862c
|
renamed file
|
2020-10-30 17:06:27 +00:00 |
|
|
|
9921f92fba
|
saving work
|
2020-10-30 13:30:58 +00:00 |
|
|
|
ff1de17718
|
saving work
|
2020-10-30 13:24:11 +00:00 |
|
|
|
d854f8f750
|
added log bpxplots i.e boxplot_log.R
|
2020-10-30 13:23:29 +00:00 |
|
|
|
7946d8cf72
|
minor edit to titles
|
2020-10-30 13:22:47 +00:00 |
|
|
|
d512fd4e34
|
added boxplot_linear.R to separate linear and log plots
|
2020-10-30 13:14:42 +00:00 |
|
|
|
936bc23aa2
|
added summary_stats_time_group for sam and serum
|
2020-10-30 13:06:02 +00:00 |
|
|
|
a2dbecd03d
|
updated un[aired stats with n_obs_complete and removed mediator vitd from sam and npa
|
2020-10-30 13:04:45 +00:00 |
|
|
|
1b5d353060
|
added summary_stats_time_group_npa.R for NPA
|
2020-10-30 11:57:08 +00:00 |
|
|
|
15bba91cee
|
updated header file with packes for summary stats
|
2020-10-30 11:53:26 +00:00 |
|
|
|
7463f9ac1c
|
ploting npa before sam and serum for boxplots
|
2020-10-29 18:56:31 +00:00 |
|
|
|
540b6c5bf7
|
generating plots for all sample types withoout stats
|
2020-10-29 18:50:25 +00:00 |
|
|
|
c26171d12c
|
playing with display
|
2020-10-29 17:41:39 +00:00 |
|
|
|
2634aeeb84
|
added boxplot.R
|
2020-10-29 16:57:27 +00:00 |
|
|
|
ad537a3ace
|
added "/" at the end of outdir_plots
|
2020-10-29 13:26:09 +00:00 |
|
|
|
e1f97df805
|
ran scripts to check
|
2020-10-29 13:20:51 +00:00 |
|
|
|
1e6e9eaef1
|
tidy scripts and using age as criteria for adults
|
2020-10-29 13:10:39 +00:00 |
|
|
|
49c18d390f
|
trychecking if summary stats may be added to the output
|
2020-10-29 12:44:35 +00:00 |
|
|
|
bbdd2d12e5
|
changed df to adults df to extract relevant info
|
2020-10-29 10:45:49 +00:00 |
|
|
|
9e5b202f5d
|
added legend_adjustment.R and included this in Header_TT
|
2020-10-26 21:40:24 +00:00 |
|
|
|
a50cb6d331
|
ah, found it, added lf data number check to flu stats
|
2020-10-26 20:18:26 +00:00 |
|
|
|
6da0bd2e00
|
added stats_check.R to cross check
|
2020-10-26 20:16:24 +00:00 |
|
|
|
f13d1212e9
|
apparently modifed flu stats for npa: check!
|
2020-10-26 20:15:44 +00:00 |
|
|
|
ae1e663caf
|
name generation for output files for other stats
|
2020-10-26 16:18:20 +00:00 |
|
|
|
6e54f339d1
|
reformatted to generate outfile_name for flu stats
|
2020-10-26 16:12:51 +00:00 |
|
|
|
61fbb2f8d6
|
formatted non-flu stats in the same way as the flu ones
|
2020-10-26 14:33:20 +00:00 |
|
|
|
efcdb1a34d
|
renamed files
|
2020-10-26 13:55:16 +00:00 |
|
|
|
fe382dbf89
|
separated checks from flu stats and added bonferrroni p
|
2020-10-26 13:52:15 +00:00 |
|
|
|
8e06f382c0
|
minor tweaks to read_data.R
|
2020-10-26 12:11:08 +00:00 |
|
|
|
745f45eb6d
|
creating outdirs if doesn't exista and reading master file from backup
|
2020-10-26 12:02:38 +00:00 |
|
|
|
c553ef3be0
|
moved out old scripts
|
2020-10-24 23:19:23 +01:00 |
|
|
|
e99935fdd1
|
updated .gitignore
|
2020-10-24 23:15:43 +01:00 |
|
|
|
fd731f9a22
|
updated .gitignore
|
2020-10-24 23:14:35 +01:00 |
|
|
|
4e60deb63d
|
added .gitignore
|
2020-10-24 23:13:22 +01:00 |
|
|
|
de5b07edc7
|
added Header, read_data.R & data_extraction scripts
|
2020-10-24 23:11:44 +01:00 |
|
|
|
69e8ac0ea8
|
added stats for flu subjects only sam, serum & npa
|
2020-10-24 23:10:49 +01:00 |
|
|
|
87559ea021
|
tidy up stats for all adults for sam, serum & npa
|
2020-10-24 23:09:49 +01:00 |
|
