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12eee6923a
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added checks.R
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2020-11-17 17:31:22 +00:00 |
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4766d6d450
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added clinical data extraction and logistic regression script
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2020-11-17 17:30:05 +00:00 |
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05f1f716f1
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updated Header_TT.R with reg libs
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2020-11-17 17:29:24 +00:00 |
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ba3c4564ea
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ran quick stats checks with wf data
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2020-11-02 18:31:29 +00:00 |
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f14c7ca64b
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outputting svg for plots with stats
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2020-11-02 17:20:38 +00:00 |
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b94d9a3fdb
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renamed file to reflect stats for linear graphs
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2020-11-02 16:39:37 +00:00 |
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abf615baeb
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removed boxplot_function as try error handle sit now!
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2020-11-02 16:37:44 +00:00 |
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a4d305d44b
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added TASK at the beginning of the scripts
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2020-11-02 16:36:52 +00:00 |
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8033c1785f
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added try catch for error handling
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2020-11-02 16:26:22 +00:00 |
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9c141326aa
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enter the commit message for your changes. Lines starting
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2020-11-02 15:04:40 +00:00 |
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b8ff7995ac
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added boxplot_stat_log.R to generate graphs with log data and stats
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2020-11-02 14:28:52 +00:00 |
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550e8b2c50
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renamed file
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2020-11-02 12:06:46 +00:00 |
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9fc9a5852b
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renamed file
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2020-11-02 12:05:55 +00:00 |
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ee35e1cb20
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renamed file boxplot_stat.R to boxplot_stat_all.R
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2020-11-02 11:37:22 +00:00 |
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26f90ee2c0
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added plot_data.R to source for plotting
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2020-11-01 16:47:54 +00:00 |
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4ca975bf81
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added boxplot_stat.R to output plots for all sample types
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2020-11-01 16:46:42 +00:00 |
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dc775a4486
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added boxplot_stat_test.R to test boxplot_stat_function independently
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2020-11-01 16:46:09 +00:00 |
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c0d993b232
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isolating function from running on data
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2020-11-01 16:44:42 +00:00 |
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eaa8416255
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changed cols for groups
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2020-10-31 20:53:44 +00:00 |
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6375a53feb
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rendering formatted pvalue on graph
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2020-10-31 20:46:06 +00:00 |
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dd54f10ad8
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making it work with function and ggarrange to combine plots
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2020-10-31 20:43:07 +00:00 |
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6575fc7aba
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updating the function
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2020-10-31 19:52:18 +00:00 |
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9c67a208e2
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added annotation to the plot with annotate, still testing
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2020-10-31 19:30:12 +00:00 |
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558f57c61e
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tweaking layout in test
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2020-10-31 18:30:20 +00:00 |
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8015dd4d6a
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fixed colours as well
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2020-10-30 20:56:15 +00:00 |
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1ed09ac20b
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nearly, adding correct y_pos to plot the stat labels
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2020-10-30 19:48:28 +00:00 |
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af334b559e
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added boxplot_stat_function.R
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2020-10-30 17:23:40 +00:00 |
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3274d3f08b
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testing boxplot with stats
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2020-10-30 17:22:46 +00:00 |
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ed10be8f6e
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testing boxplots
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2020-10-30 17:10:20 +00:00 |
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8358c0862c
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renamed file
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2020-10-30 17:06:27 +00:00 |
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9921f92fba
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saving work
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2020-10-30 13:30:58 +00:00 |
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ff1de17718
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saving work
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2020-10-30 13:24:11 +00:00 |
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d854f8f750
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added log bpxplots i.e boxplot_log.R
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2020-10-30 13:23:29 +00:00 |
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7946d8cf72
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minor edit to titles
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2020-10-30 13:22:47 +00:00 |
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d512fd4e34
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added boxplot_linear.R to separate linear and log plots
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2020-10-30 13:14:42 +00:00 |
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936bc23aa2
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added summary_stats_time_group for sam and serum
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2020-10-30 13:06:02 +00:00 |
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a2dbecd03d
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updated un[aired stats with n_obs_complete and removed mediator vitd from sam and npa
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2020-10-30 13:04:45 +00:00 |
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1b5d353060
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added summary_stats_time_group_npa.R for NPA
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2020-10-30 11:57:08 +00:00 |
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15bba91cee
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updated header file with packes for summary stats
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2020-10-30 11:53:26 +00:00 |
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7463f9ac1c
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ploting npa before sam and serum for boxplots
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2020-10-29 18:56:31 +00:00 |
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540b6c5bf7
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generating plots for all sample types withoout stats
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2020-10-29 18:50:25 +00:00 |
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c26171d12c
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playing with display
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2020-10-29 17:41:39 +00:00 |
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2634aeeb84
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added boxplot.R
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2020-10-29 16:57:27 +00:00 |
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ad537a3ace
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added "/" at the end of outdir_plots
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2020-10-29 13:26:09 +00:00 |
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e1f97df805
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ran scripts to check
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2020-10-29 13:20:51 +00:00 |
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1e6e9eaef1
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tidy scripts and using age as criteria for adults
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2020-10-29 13:10:39 +00:00 |
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49c18d390f
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trychecking if summary stats may be added to the output
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2020-10-29 12:44:35 +00:00 |
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bbdd2d12e5
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changed df to adults df to extract relevant info
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2020-10-29 10:45:49 +00:00 |
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9e5b202f5d
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added legend_adjustment.R and included this in Header_TT
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2020-10-26 21:40:24 +00:00 |
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a50cb6d331
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ah, found it, added lf data number check to flu stats
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2020-10-26 20:18:26 +00:00 |
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