apparently modifed flu stats for npa: check!
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1 changed files with 6 additions and 2 deletions
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@ -35,8 +35,12 @@ lf = npa_adults_lf[npa_adults_lf$flustat == 1,]
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table(lf$timepoint)
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lf$timepoint = paste0("t", lf$timepoint)
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my_sample_type = "npa"
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if (table(lf$flustat) == table(npa_adults_lf$flustat)[[2]]){
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cat("Analysing Flu positive patients for:", my_sample_type)
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}else{
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cat("FAIL: problem with subsetting data for:", my_sample_type)
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quit()
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}
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########################################################################
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# Unpaired stats at each timepoint b/w groups: wilcoxon UNpaired analysis
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# with correction
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