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added sample test data for processing to get correct annotations

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Tanushree Tunstall 2022-03-24 17:42:02 +00:00
parent 005efb1e0e
commit 6a9d23ec8f
3 changed files with 87 additions and 0 deletions
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test_data/sample_data.csv Normal file
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id,mutationinformation,position,pyrazinamide,mutation_info_labels,drtype
S1,M1A,1,0,DM,MDR
S2,M1A,1,1,DM,Pre-MDR
S3,M1A,1,1,OM,Sensitive
S4,M1A,1,NA,OM,Others
S5,M1A,1,1,OM,Pre-XDR
S6,M1A,1,1,DM,XDR
S7,M1B,1,NA,OM,MDR
S8,M1B,1,1,DM,MDR
S9,M1B,1,NA,DM,Other
S10,M1B,1,0,OM,Sensitive
S11,M1C,1,NA,OM,Pre-XDR
S12,M1C,1,NA,OM,Pre-XDR
S13,M1C,1,1,OM,MDR
S14,M1C,1,NA,DM,MDR
S15,A2B,2,0,OM,Others
S16,A2B,2,0,OM,XDR
S17,A2C,2,NA,DM,Pre-MDR
S18,A2C,2,1,DM,Pre-MDR
S19,D3E,3,1,DM,XDR
S20,D3E,3,NA,DM,MDR
S21,D3E,3,NA,OM,Pre-MDR
S22,D3P,3,0,OM,Pre-MDR
S23,D3A,3,0,OM,Sensitive
S24,P4A,4,NA,OM,Others
S25,P5A,5,1,DM,Sensitive
1 id mutationinformation position pyrazinamide mutation_info_labels drtype
2 S1 M1A 1 0 DM MDR
3 S2 M1A 1 1 DM Pre-MDR
4 S3 M1A 1 1 OM Sensitive
5 S4 M1A 1 NA OM Others
6 S5 M1A 1 1 OM Pre-XDR
7 S6 M1A 1 1 DM XDR
8 S7 M1B 1 NA OM MDR
9 S8 M1B 1 1 DM MDR
10 S9 M1B 1 NA DM Other
11 S10 M1B 1 0 OM Sensitive
12 S11 M1C 1 NA OM Pre-XDR
13 S12 M1C 1 NA OM Pre-XDR
14 S13 M1C 1 1 OM MDR
15 S14 M1C 1 NA DM MDR
16 S15 A2B 2 0 OM Others
17 S16 A2B 2 0 OM XDR
18 S17 A2C 2 NA DM Pre-MDR
19 S18 A2C 2 1 DM Pre-MDR
20 S19 D3E 3 1 DM XDR
21 S20 D3E 3 NA DM MDR
22 S21 D3E 3 NA OM Pre-MDR
23 S22 D3P 3 0 OM Pre-MDR
24 S23 D3A 3 0 OM Sensitive
25 S24 P4A 4 NA OM Others
26 S25 P5A 5 1 DM Sensitive