added MultClassPipe2 that has one hot encoder step to the pipeline
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4 changed files with 51 additions and 17 deletions
56
my_data9.py
56
my_data9.py
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@ -7,7 +7,12 @@ Created on Sat Mar 5 12:57:32 2022
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"""
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#%%
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# data, etc for now comes from my_data6.py and/or my_data5.py
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#%%
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homedir = os.path.expanduser("~")
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os.chdir(homedir + "/git/ML_AI_training/")
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# my function
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from MultClassPipe2 import MultClassPipeline2
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#%% try combinations
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#import sys, os
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#os.system("imports.py")
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@ -45,11 +50,19 @@ X_train, X_test, y_train, y_test = train_test_split(all_features_df,
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preprocessor = ColumnTransformer(
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transformers=[
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('num', MinMaxScaler() , numerical_features_names)
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#,('cat', OneHotEncoder(), categorical_features_names)
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])
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,('cat', OneHotEncoder(), categorical_features_names)
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], remainder = 'passthrough')
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f = preprocessor.fit(numerical_features_df)
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f2 = preprocessor.transform(numerical_features_df)
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f3 = preprocessor.fit_transform(numerical_features_df)
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(f3==f2).all()
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f4 = preprocessor.fit_transform(all_features_df)
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f4
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reprocessor.fit_transform(numerical_features_df)
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preprocessor.fit(numerical_features_df)
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preprocessor.transform(numerical_features_df)
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#%%
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model_log = Pipeline(steps = [
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('preprocess', preprocessor)
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@ -90,21 +103,30 @@ output = cross_validate(model, X_trainN, y_trainN
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, cv = 10
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, return_train_score = False)
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pd.DataFrame(output).mean()
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#%% Run multiple models using MultClassPipeline
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# only good for numerical features as categ features is not supported yet!
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t1_res = MultClassPipeline2(X_trainN, X_testN, y_trainN, y_testN, input_df = all_features_df)
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t1_res
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t2_res = MultClassPipeline2(X_train, X_test, y_train, y_test, input_df = all_features_df)
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t2_res
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#%%
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# https://machinelearningmastery.com/columntransformer-for-numerical-and-categorical-data/
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#Each transformer is a three-element tuple that defines the name of the transformer, the transform to apply, and the column indices to apply it to. For example:
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# (Name, Object, Columns)
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selector_logistic = RFECV(estimator = model
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, cv = 10
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, step = 1)
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# Determine categorical and numerical features
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numerical_ix = all_features_df.select_dtypes(include=['int64', 'float64']).columns
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numerical_ix
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categorical_ix = all_features_df.select_dtypes(include=['object', 'bool']).columns
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categorical_ix
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X_trainN, X_testN, y_trainN, y_testN = train_test_split(numerical_features_df
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, target1
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, test_size = 0.33
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, random_state = 42)
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# Define the data preparation for the columns
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t = [('cat', OneHotEncoder(), categorical_ix)
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, ('num', MinMaxScaler(), numerical_ix)]
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col_transform = ColumnTransformer(transformers=t
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, remainder='passthrough')
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# create pipeline (unlike example above where the col transfer was a preprocess step and it was fit_transformed)
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selector_logistic_xtrain = selector_logistic.fit_transform(X_trainN, y_trainN)
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print(sel_rfe_logistic.get_support())
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X_trainN.columns
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print(sel_rfe_logistic.ranking_)
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pipeline = Pipeline(steps=[('prep', col_transform)
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, ('classifier', clf)])
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