LSHTM_analysis/scripts/plotting/running_plotting_scripts.txt

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#========
# basic_barplots_PS.R:
#========
./basic_barplots_PS.R -d streptomycin -g gid -f /home/tanu/gid_test_file.csv
sources:
## plotting_globals.R (previously dir.R)
## plotting_data.R
# TODO
Delete: dirs.R
after grepping
barplots_subcolours_aa_combined.R:source("dirs.R")
basic_barplots_PS.R:source("dirs.R")
resolving_ambiguous_muts.R:source("dirs.R")
#=======================================================================
#========
# basic_barplots_foldx.R:
#========
./basic_barplots_foldx.R -d streptomycin -g gid
# picks default file name, or you can specify by the -f flag
sources:
## plotting_globals.R (previously dir.R)
## plotting_data.R
#========
# basic_barplots_LIG.R:
#========
./basic_barplots_LIG.R -d streptomycin -g gid
# picks default file name, or you can specify by the -f flag
sources:
## plotting_globals.R (previously dir.R)
## plotting_data.R