40 lines
896 B
Bash
Executable file
40 lines
896 B
Bash
Executable file
#!/bin/bash
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# Create a drug directory structure for processing
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#
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#
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# Structure:
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#
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# $DATA_DIR/$DRUG/input
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# |- original
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# |- processed
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# |- structure
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#
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# $DATA_DIR/$DRUG/output
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# |- plots
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# |- structure
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DATA_DIR=~/git/Data
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if [[ $1 == '' ]]; then
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echo "usage: mk-drug-dirs.sh <drug name>";
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exit;
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else
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DRUG=$1
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echo Creating structure for: $DRUG
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if [ -d $DATA_DIR ]
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then
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echo Doing creation in $DATA_DIR
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mkdir -p $DATA_DIR/$DRUG/input/original
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mkdir -p $DATA_DIR/$DRUG/input/processed
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mkdir -p $DATA_DIR/$DRUG/input/structure
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mkdir -p $DATA_DIR/$DRUG/output/plots
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mkdir -p $DATA_DIR/$DRUG/output/structure
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else
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echo "Error: $DATA_DIR does not exist. Did you check it out of git?"
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exit
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fi
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fi
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