63 lines
2.5 KiB
R
63 lines
2.5 KiB
R
############################################################################
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# merged_df3 = read.csv("~/git/Data/cycloserine/output/alr_all_params.csv"); source("~/git/LSHTM_analysis/config/alr.R")
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# if ( tolower(gene) == "alr") {
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# aa_pos_lig1 = NULL
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# aa_pos_lig2 = NULL
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# aa_pos_lig3 = NULL
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# p_title = gene
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# }
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source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
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###########################################################################
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# merged_df3 = read.csv("~/git/Data/ethambutol/output/embb_all_params.csv"); source("~/git/LSHTM_analysis/config/embb.R")
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# if ( tolower(gene) == "embb") {
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# aa_pos_lig1 = aa_pos_ca
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# aa_pos_lig2 = aa_pos_cdl
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# aa_pos_lig3 = aa_pos_dsl
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# p_title = gene
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# }
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source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
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###########################################################################
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merged_df3 = read.csv("~/git/Data/streptomycin/output/gid_all_params.csv")
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source("~/git/LSHTM_analysis/config/gid.R")
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if ( tolower(gene) == "gid") {
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aa_pos_lig1 = aa_pos_rna
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aa_pos_lig2 = aa_pos_sam
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aa_pos_lig3 = aa_pos_amp
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p_title = gene
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}
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source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
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###########################################################################
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# merged_df3 = read.csv("~/git/Data/isoniazid/output/katg_all_params.csv"); source("~/git/LSHTM_analysis/config/katg.R")
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# if ( tolower(gene) == "katg") {
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# aa_pos_lig1 = aa_pos_hem
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# aa_pos_lig2 = NULL
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# aa_pos_lig3 = NULL
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# p_title = gene
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# }
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source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
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###########################################################################
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# merged_df3 = read.csv("~/git/Data/pyrazinamide/output/pnca_all_params.csv"); source("~/git/LSHTM_analysis/config/pnca.R")
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# if ( tolower(gene) == "pnca") {
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# aa_pos_lig1 = aa_pos_fe
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# aa_pos_lig2 = NULL
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# aa_pos_lig3 = NULL
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# p_title = gene
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# }
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source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
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###########################################################################
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merged_df3 = read.csv("~/git/Data/rifampicin/output/rpob_all_params.csv"); source("~/git/LSHTM_analysis/config/rpob.R")
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if ( tolower(gene) == "rpob") {
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aa_pos_lig1 = NULL
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aa_pos_lig2 = NULL
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aa_pos_lig3 = NULL
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p_title = gene
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}
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source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
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#########################################################################
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