Commit graph

182 commits

Author SHA1 Message Date
23bb087ea3 plot function fixes for position tiles 2022-09-06 17:06:01 +01:00
e9fb582db9 msa indexes 2022-09-05 18:49:40 +01:00
1241ad0b22 various usability tweaks to LogoPlotMSA and position_annotation 2022-09-05 16:06:10 +01:00
00ca7a6b27 tweaks 2022-09-02 09:52:11 +01:00
82e2da4f3b ml df stuff 2022-09-01 11:39:11 +01:00
317b97bc9c stuff 2022-08-30 12:10:56 +01:00
7c2e4b898e added rpob plot scripts 2022-08-29 23:27:13 +01:00
8f97ab7cc8 rpob 2022-08-29 18:23:47 +01:00
c6f5a446c3 stuff 2022-08-27 15:35:48 +01:00
79b251047d allow position_annotation to specify colours 2022-08-27 15:35:48 +01:00
ca619bc662 fix directory assumption 2022-08-25 18:02:25 +01:00
afa9166ca8 things 2022-08-25 17:58:04 +01:00
cd76a4b919 things 2022-08-25 17:58:04 +01:00
3b77b4b611 stuff 2022-08-25 17:58:04 +01:00
04253b961f lots of per-plot configs 2022-08-22 21:56:13 +01:00
13999a477d fixed source to contain plotting cols and pos_count correctly 2022-08-22 14:33:06 +01:00
4147a6b90f a massive waste of time 2022-08-22 13:05:53 +01:00
8d6c148fff renamed 2 to _v2 2022-08-22 11:43:13 +01:00
802d6f8495 renamed 2 to _v2 2022-08-22 11:41:42 +01:00
c9d7ea9fad AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2022-08-17 18:42:26 +01:00
2e29cf8011 config files 2022-08-15 20:39:59 +01:00
0cc7a8fcae config: add tile stuff for all targets. Other functions: many rewrites! 2022-08-15 20:39:59 +01:00
a3e5283a9b generated ggpairs plots finally 2022-08-15 19:05:22 +01:00
7c40e13771 dadded v2 of barplot layput 2022-08-14 22:56:08 +01:00
da8f8d90d4 removed setDT and replaced with dplyr alt in position_count_bp.R 2022-08-14 14:19:09 +01:00
939528024a turn off thing 2022-08-14 12:35:09 +01:00
6f354ab390 oops! 2022-08-14 12:17:42 +01:00
c8f3ddf892 colour changes 2022-08-13 15:49:24 +01:00
c6a720770d some stuff 2022-08-13 15:47:41 +01:00
3d3e74306c added log10 to corr plot labels 2022-08-11 21:01:16 +01:00
b302daaa60 rearranged corr plot cols and also added example for ggpairs 2022-08-11 20:56:34 +01:00
842efe4409 created prominent effect calcualtions 2022-08-10 20:02:43 +01:00
3af11ec3d3 wideP_consurf3 2022-08-10 14:08:43 +01:00
0bcbb44ae5 addded old script to redundant 2022-08-10 14:08:23 +01:00
2f7558a883 aadded colnames to plot as names 2022-08-10 14:08:23 +01:00
4315adc556 wideP_consurf3 2022-08-10 14:07:11 +01:00
285b28b1d6 various plots 2022-08-10 11:06:13 +01:00
a6d93b3fa8 starting corr plots 2022-08-09 21:55:24 +01:00
d78b072732 comment out run 2022-08-09 20:00:42 +01:00
af03fc6fd6 various 2022-08-09 19:56:17 +01:00
415d05ab6e various stuff 2022-08-09 19:42:29 +01:00
5cbaef3d36 various heat-bar/position tile faff 2022-08-09 19:42:29 +01:00
94454d6fba added combined lineage plot 2022-08-09 19:34:07 +01:00
79d83b6240 various changes 2022-08-09 13:46:05 +01:00
4ce2087224 various changes 2022-08-08 16:48:53 +01:00
5bdfd03443 refactored dm om plots and generated the final layout 2022-08-08 16:46:27 +01:00
28510471f0 consurf tile fixes 2022-08-08 15:37:28 +01:00
0234a8f77b more plot modifications dm and om plots mainly 2022-08-08 15:32:16 +01:00
4e6f10d1ba added outcome col to dm_om data 2022-08-07 11:21:25 +01:00
c968089cd2 refactoring logo plots to add flame bar 2022-08-06 18:48:12 +01:00