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redundant
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addded old script to redundant
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2022-08-10 14:08:23 +01:00 |
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tests
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added the rev script that i used to develop the trimmed version
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2022-08-05 14:36:58 +01:00 |
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aa_prop_bp.R
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added first line to all func to run from
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2021-06-24 10:02:14 +01:00 |
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bp_lineage.R
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various tweaks to make the RShiny dashboards work
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2022-04-28 20:21:03 +01:00 |
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bp_lineage_diversity.R
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breakage
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2022-08-05 12:45:16 +01:00 |
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bp_subcolours.R
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AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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2022-08-17 18:42:26 +01:00 |
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combining_dfs_plotting.R
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created prominent effect calcualtions
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2022-08-10 20:02:43 +01:00 |
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consurfP.R
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fix some derps
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2022-08-04 13:46:52 +01:00 |
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corr_plot_data.R
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renamed 2 to _v2
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2022-08-22 11:41:42 +01:00 |
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dm_om_data.R
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renamed 2 to _v2
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2022-08-22 11:41:42 +01:00 |
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ed_pfm_data.R
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updated docs for the logo functions and tested all of them again
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2022-01-26 15:53:53 +00:00 |
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generate_distance_colour_map.R
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config: add tile stuff for all targets. Other functions: many rewrites!
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2022-08-15 20:39:59 +01:00 |
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lf_bp.R
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lf_bp2
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2022-08-05 18:13:44 +01:00 |
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lf_bp2.R
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refactored dm om plots and generated the final layout
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2022-08-08 16:46:27 +01:00 |
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lf_unpaired_stats.R
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reflected the factor thing as been added as new additon
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2022-08-05 20:00:04 +01:00 |
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lineage_dist.R
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saving from my panino, made lineage dist plots
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2022-08-04 13:47:24 +01:00 |
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lineage_plot_data.R
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buggy bugs that bug me
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2022-08-04 15:18:23 +01:00 |
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logoP_msa.R
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wideP_consurf3
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2022-08-10 14:08:43 +01:00 |
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logoP_or.R
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AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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2022-08-17 18:42:26 +01:00 |
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logoP_snp.R
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config files
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2022-08-15 20:39:59 +01:00 |
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my_logolas.R
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tested edplot with alr gene
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2022-01-26 13:35:57 +00:00 |
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my_pairs_panel.R
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multiple script updates and bug fixes
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2022-08-04 16:48:31 +01:00 |
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myaf_or_calcs.R
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added log10 OR and P values to myaf_or_calcs.R
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2021-08-23 20:01:01 +01:00 |
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mychisq_or.R
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added first line to all func to run from
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2021-06-24 10:02:14 +01:00 |
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plotting_data.R
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added additional check in combining_df_plotting.R to account for check when generating merged_df2 as muts NOT present in mcsm can create trouble, so fixed that and ran it successfully for alr and katg
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2022-01-18 17:36:54 +00:00 |
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plotting_globals.R
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renamed 2 to _v2
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2022-08-22 11:41:42 +01:00 |
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position_annotation.R
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AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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2022-08-17 18:42:26 +01:00 |
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position_count_bp.R
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generated ggpairs plots finally
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2022-08-15 19:05:22 +01:00 |
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stability_count_bp.R
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generated ggpairs plots finally
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2022-08-15 19:05:22 +01:00 |
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wideP_consurf.R
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various plots
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2022-08-10 11:06:13 +01:00 |
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wideP_consurf3.R
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oops!
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2022-08-14 12:17:42 +01:00 |
