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@ -1,9 +1,15 @@
mCSM Analysis mCSM
============= =============
This contains scripts that does the following: This contains scripts that does the following:
1. mCSM analysis: using bash, python and R 1. mcsm.py: function for submitting mcsm job and extracting results
2. meta data analysis: using python and R 2. run_mcsm.py: wrapper to call mcsm.py
foldx
=============
This contains scripts that does the following:
1. runFoldx.py: submitting foldx requests and extracting results
2. runfoldx.sh: is wrapped by runFoldx.py
Requires an additional 'Data' directory. Batteries not included:-) Requires an additional 'Data' directory. Batteries not included:-)
@ -17,17 +23,17 @@ Requires an additional 'Data' directory. Batteries not included:-)
subdirs within this repo subdirs within this repo
``` ```
meta\_data\_analysis/ scripts
*.R *.R
*.py *.py
<plotting>/
*.R
mcsm_analysis
mcsm
# <drug>/ # <drug>/
foldx_analysis foldx
plotting
*.R
``` ```