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Tanushree Tunstall 2022-08-05 18:49:26 +01:00
parent 92fba43dc1
commit 9c955cddc0
1 changed files with 7 additions and 5 deletions
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12
scripts/functions/dm_om_data.R
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@ -92,8 +92,8 @@ dm_om_wf_lf_data <- function(df
, "log10_or_mychisq" , "neglog_pval_fisher" , "maf" #"af"
, "ddg_dynamut2" , "ddg_dynamut2_scaled", "ddg_dynamut2_outcome"
, "mcsm_ppi2_affinity" , "mcsm_ppi2_scaled" , "mcsm_ppi2_outcome"
, "consurf_score" , "consurf_scaled" , "consurf_outcome"
, "consurf_colour_rev" # exists now
, "consurf_score" , "consurf_scaled" , "consurf_outcome" # exists now
, "consurf_colour_rev"
, "snap2_score" , "snap2_scaled" , "snap2_outcome"
, "mcsm_na_affinity" , "mcsm_na_scaled" , "mcsm_na_outcome"
, "provean_score" , "provean_scaled" , "provean_outcome")
@ -168,10 +168,12 @@ new_colnames = c(asa = "ASA"
, ddg_dynamut2_scaled = dynamut2_dn
, mcsm_na_scaled = mcsm_na_dn
, mcsm_ppi2_scaled = mcsm_ppi2_dn
, consurf_scaled = consurf_dn
#, consurf_scaled = consurf_dn
, consurf_score = consurf_dn
#, consurf_colour_rev = consurf_dn
, snap2_scaled = snap2_dn
, provean_scaled = provean_dn)
#, snap2_scaled = snap2_dn
, snap2_score = snap2_dn
, provean_score = provean_dn)
comb_df_sl1 = plyr::rename(comb_df_s