From 9c955cddc05cd76a2cb7c0e4aa38ddcc37405056 Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Fri, 5 Aug 2022 18:49:26 +0100 Subject: [PATCH] still playing --- scripts/functions/dm_om_data.R | 12 +++++++----- 1 file changed, 7 insertions(+), 5 deletions(-) diff --git a/scripts/functions/dm_om_data.R b/scripts/functions/dm_om_data.R index e2b937e..29389d5 100644 --- a/scripts/functions/dm_om_data.R +++ b/scripts/functions/dm_om_data.R @@ -92,8 +92,8 @@ dm_om_wf_lf_data <- function(df , "log10_or_mychisq" , "neglog_pval_fisher" , "maf" #"af" , "ddg_dynamut2" , "ddg_dynamut2_scaled", "ddg_dynamut2_outcome" , "mcsm_ppi2_affinity" , "mcsm_ppi2_scaled" , "mcsm_ppi2_outcome" - , "consurf_score" , "consurf_scaled" , "consurf_outcome" - , "consurf_colour_rev" # exists now + , "consurf_score" , "consurf_scaled" , "consurf_outcome" # exists now + , "consurf_colour_rev" , "snap2_score" , "snap2_scaled" , "snap2_outcome" , "mcsm_na_affinity" , "mcsm_na_scaled" , "mcsm_na_outcome" , "provean_score" , "provean_scaled" , "provean_outcome") @@ -168,10 +168,12 @@ new_colnames = c(asa = "ASA" , ddg_dynamut2_scaled = dynamut2_dn , mcsm_na_scaled = mcsm_na_dn , mcsm_ppi2_scaled = mcsm_ppi2_dn - , consurf_scaled = consurf_dn + #, consurf_scaled = consurf_dn + , consurf_score = consurf_dn #, consurf_colour_rev = consurf_dn - , snap2_scaled = snap2_dn - , provean_scaled = provean_dn) + #, snap2_scaled = snap2_dn + , snap2_score = snap2_dn + , provean_score = provean_dn) comb_df_sl1 = plyr::rename(comb_df_s