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Tanushree Tunstall 2022-09-14 17:11:39 +01:00
parent 4f01695391
commit 25cfe39c71
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scripts/aa_index_scripts/aa_header_selected_names.txt Normal file
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BENS940104 Genetic code matrix (Benner et al., 1994)
DOSZ010103 An amino acid similarity matrix based on the THREADER force field (Dosztanyi-Torda, 2001)
GIAG010101 Residue substitutions matrix from thermo/mesophilic to psychrophilic enzymes (Gianese et al., 2001)
MIYT790101 Amino acid pair distance (Miyata et al., 1979)
OVEJ920102 Environment-specific amino acid substitution matrix for alpha residues (Overington et al., 1992)
RISJ880101 Scoring matrix (Risler et al., 1988)

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scripts/aa_index_scripts/names_ML_selected Normal file
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grep -Ei "BENS940104|GIAG010101|DOSZ010103|RISJ880101|MIYT790101|OVEJ920102" aa_headerNames.txt
grep -Ei "BENS940104|GIAG010101|DOSZ010103|RISJ880101|MIYT790101|OVEJ920102" aaindex/data/*