diff --git a/boxplot_linear.R b/boxplot_linear.R index f289a13..27b1169 100755 --- a/boxplot_linear.R +++ b/boxplot_linear.R @@ -10,7 +10,7 @@ my_samples = "npa_sam_serum" #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/boxplot_log.R b/boxplot_log.R index a2eec57..96fee73 100755 --- a/boxplot_log.R +++ b/boxplot_log.R @@ -10,7 +10,7 @@ my_samples = "npa_sam_serum" #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/flu_stats_unpaired_npa.R b/flu_stats_unpaired_npa.R index 8750b16..40337d0 100755 --- a/flu_stats_unpaired_npa.R +++ b/flu_stats_unpaired_npa.R @@ -13,7 +13,7 @@ my_sample_type = "npa" #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/flu_stats_unpaired_sam.R b/flu_stats_unpaired_sam.R index 6327834..c950637 100755 --- a/flu_stats_unpaired_sam.R +++ b/flu_stats_unpaired_sam.R @@ -13,7 +13,7 @@ my_sample_type = "sam" #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/flu_stats_unpaired_serum.R b/flu_stats_unpaired_serum.R index 367ba1f..1fb2c6d 100755 --- a/flu_stats_unpaired_serum.R +++ b/flu_stats_unpaired_serum.R @@ -10,7 +10,7 @@ my_sample_type = "serum" #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/plot_data.R b/plot_data.R index a1150ca..552c658 100755 --- a/plot_data.R +++ b/plot_data.R @@ -10,7 +10,7 @@ getwd() #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/summary_stats_time_group_npa.R b/summary_stats_time_group_npa.R index cd2f4f6..98de064 100755 --- a/summary_stats_time_group_npa.R +++ b/summary_stats_time_group_npa.R @@ -13,7 +13,7 @@ my_sample_type = "npa" #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/summary_stats_time_group_sam.R b/summary_stats_time_group_sam.R index b93aa33..3634747 100755 --- a/summary_stats_time_group_sam.R +++ b/summary_stats_time_group_sam.R @@ -13,7 +13,7 @@ my_sample_type = "sam" #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/summary_stats_time_group_serum.R b/summary_stats_time_group_serum.R index 626a2e1..fdce108 100755 --- a/summary_stats_time_group_serum.R +++ b/summary_stats_time_group_serum.R @@ -13,7 +13,7 @@ my_sample_type = "serum" #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") # check: adult variable and age variable discrepancy! metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18] diff --git a/test_flu_counts.R b/test_flu_counts.R index 0677d1d..8047d61 100755 --- a/test_flu_counts.R +++ b/test_flu_counts.R @@ -8,7 +8,7 @@ getwd() #============= # Input #============= -source("data_extraction_formatting.R") +source("data_extraction_mediators.R") #%%======================================================== # data assignment for stats