From 9921f92fbadacafb8599099f2deb6b8a4fe2f7f2 Mon Sep 17 00:00:00 2001
From: Tanushree Tunstall <tanu@tunstall.in>
Date: Fri, 30 Oct 2020 13:30:58 +0000
Subject: [PATCH] saving work

---
 boxplot.R                        | 0
 boxplot_linear.R                 | 0
 boxplot_log.R                    | 8 ++++----
 summary_stats_time_group_serum.R | 0
 4 files changed, 4 insertions(+), 4 deletions(-)
 mode change 100644 => 100755 boxplot.R
 mode change 100644 => 100755 boxplot_linear.R
 mode change 100644 => 100755 boxplot_log.R
 mode change 100644 => 100755 summary_stats_time_group_serum.R

diff --git a/boxplot.R b/boxplot.R
old mode 100644
new mode 100755
diff --git a/boxplot_linear.R b/boxplot_linear.R
old mode 100644
new mode 100755
diff --git a/boxplot_log.R b/boxplot_log.R
old mode 100644
new mode 100755
index 7864180..a2eec57
--- a/boxplot_log.R
+++ b/boxplot_log.R
@@ -18,8 +18,8 @@ metadata_all$mosaic[metadata_all$adult==1 & metadata_all$age<=18]
 #=============
 # Output:
 #=============
-outfile_bp = paste0("boxplots_log_", my_samples, ".pdf")
-output_boxplot = paste0(outdir_plots, outfile_bp); output_boxplot
+outfile_bp_log = paste0("boxplots_log_", my_samples, ".pdf")
+output_boxplot_log = paste0(outdir_plots, outfile_bp_log); output_boxplot_log
 
 #===============================
 # data assignment for plots
@@ -60,8 +60,8 @@ lf_fp_serum$timepoint = as.factor(lf_fp_serum$timepoint)
 lf_fp_serum$obesity = as.factor(lf_fp_serum$obesity)
 
 ########################################################################
-cat("Output plots will be in:", output_boxplot)
-pdf(output_boxplot, width = 20, height = 15)
+cat("Output plots will be in:", output_boxplot_log)
+pdf(output_boxplot_log, width = 20, height = 15)
 
 #=======================================================================
 #                         NPA
diff --git a/summary_stats_time_group_serum.R b/summary_stats_time_group_serum.R
old mode 100644
new mode 100755