added my sample 3pl1 json file with 4 muts to test the json validator
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test_tt_3pl1_example.py
Executable file
28
test_tt_3pl1_example.py
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#!/usr/bin/env python3
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# -*- coding: utf-8 -*-
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"""
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Created on Fri Nov 11 11:18:52 2022
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@author: tanu
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"""
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from validator.validator import Validator
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from validator.residue_index import ResidueIndexes
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#validator = Validator("ProKinO") # Same as in the JSON
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validator = Validator("FoldX") # Same as in the JSON
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validator.load_schema()
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print("Schema loaded successfully")
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validator.load_json("tt_3pl1_example.json")
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#print("Loaded json file successfully")
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if validator.basic_checks() and validator.validate_against_schema():
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# Passed data validations
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print('Passed schema validation')
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residue_indexes = ResidueIndexes(validator.json_data)
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if residue_indexes.check_every_residue():
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# Passed the index validation
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print('Passed index validation')
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else:
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print('Failed schema validation')
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print(validator.error_log)
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