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Adding a fix for cases when the residue API returns more than one entity per chain label

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This commit is contained in:
Mihaly Varadi 2019-02-20 14:39:12 +00:00
parent ada4ffc21c
commit b37b155bfc
4 changed files with 86 additions and 4 deletions
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10
tests/test_residue_index.py
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@ -23,6 +23,9 @@ from validator.residue_index import ResidueIndexes
with open("data/test_data.json", "r") as mock_data_file:
mock_data = json.load(mock_data_file)
with open("data/test_data_multichain.json", "r") as mock_data_file_multichain:
mock_data_multichain = json.load(mock_data_file_multichain)
mock_data_no_pdb_id = {"foo": "bar"}
mock_data_bad_numbering = {"pdb_id": "2aqa",
@ -101,4 +104,9 @@ class TestCheckResidueIndices(TestCase):
self.assertFalse(result)
result = self.cri._process_residues(
[{"author_residue_number": 1, "residue_name": "ALA", "author_insertion_code": ""}], "1", "HIS")
self.assertFalse(result)
self.assertFalse(result)
def test_with_multichain(self):
self.cri = ResidueIndexes(mock_data_multichain)
result = self.cri.check_every_residue()
self.assertTrue(result)