diff --git a/data_formatting.R b/data_formatting.R index f2b0c9d..5d9af81 100755 --- a/data_formatting.R +++ b/data_formatting.R @@ -3,10 +3,8 @@ getwd() setwd('~/git/covid_analysis/') getwd() ############################################################ -# TASK: basic plots - -# useful links: -# http://www.sthda.com/english/wiki/ggplot2-dot-plot-quick-start-guide-r-software-and-data-visualization +# TASK: data cleaning and manipulation to allow plotting +# and analysis ############################################################ # source data source("read_data.R") diff --git a/ks_test_all_timepoints.R b/ks_test_all_timepoints.R index 8581de5..8a39f56 100644 --- a/ks_test_all_timepoints.R +++ b/ks_test_all_timepoints.R @@ -3,10 +3,7 @@ getwd() setwd('~/git/covid_analysis/') getwd() ############################################################ -# TASK: basic plots - -# useful links: -# http://www.sthda.com/english/wiki/ggplot2-dot-plot-quick-start-guide-r-software-and-data-visualization +# TASK: KS test b/w outcome groups for ALL timepoints (cumulative) ############################################################ # source data source("read_data.R") diff --git a/ks_test_time.R b/ks_test_time.R index 0b6022c..f9ed54d 100644 --- a/ks_test_time.R +++ b/ks_test_time.R @@ -3,10 +3,7 @@ getwd() setwd('~/git/covid_analysis/') getwd() ############################################################ -# TASK: basic plots - -# useful links: -# http://www.sthda.com/english/wiki/ggplot2-dot-plot-quick-start-guide-r-software-and-data-visualization +# TASK: KS test b/w outcome groups at each timepoint ############################################################ # source data source("read_data.R") diff --git a/read_data.R b/read_data.R index fc0a0c1..420818b 100755 --- a/read_data.R +++ b/read_data.R @@ -3,10 +3,7 @@ getwd() setwd('~/git/covid_analysis/') getwd() ############################################################ -# TASK: basic plots - -# useful links: -# http://www.sthda.com/english/wiki/ggplot2-dot-plot-quick-start-guide-r-software-and-data-visualization +# TASK: Read data to serve as input for downstream analyses ############################################################ # load libraries, packages and local imports diff --git a/stats_paired.R b/stats_paired.R index ffeeeca..6972c13 100755 --- a/stats_paired.R +++ b/stats_paired.R @@ -3,10 +3,7 @@ getwd() setwd('~/git/covid_analysis/') getwd() ############################################################ -# TASK: basic plots - -# useful links: -# http://www.sthda.com/english/wiki/ggplot2-dot-plot-quick-start-guide-r-software-and-data-visualization +# TASK: paired analysis on time for mediators ############################################################ # source data source("read_data.R") diff --git a/stats_unpaired.R b/stats_unpaired.R index c9cac4d..1274486 100755 --- a/stats_unpaired.R +++ b/stats_unpaired.R @@ -3,10 +3,7 @@ getwd() setwd('~/git/covid_analysis/') getwd() ############################################################ -# TASK: basic plots - -# useful links: -# http://www.sthda.com/english/wiki/ggplot2-dot-plot-quick-start-guide-r-software-and-data-visualization +# TASK: unpaired analysis for mediators at each timepoint ############################################################ # source data source("read_data.R") diff --git a/summary_stats_time.R b/summary_stats_time.R index fb4b584..32e1897 100755 --- a/summary_stats_time.R +++ b/summary_stats_time.R @@ -3,10 +3,7 @@ getwd() setwd('~/git/covid_analysis/') getwd() ############################################################ -# TASK: basic plots - -# useful links: -# http://www.sthda.com/english/wiki/ggplot2-dot-plot-quick-start-guide-r-software-and-data-visualization +# TASK: summary stats of mediators by time ############################################################ # source data source("read_data.R") diff --git a/summary_stats_time_outcome.R b/summary_stats_time_outcome.R index 8fb6e8c..edf0968 100755 --- a/summary_stats_time_outcome.R +++ b/summary_stats_time_outcome.R @@ -3,10 +3,7 @@ getwd() setwd('~/git/covid_analysis/') getwd() ############################################################ -# TASK: basic plots - -# useful links: -# http://www.sthda.com/english/wiki/ggplot2-dot-plot-quick-start-guide-r-software-and-data-visualization +# TASK: summary stats of mediators by time and outcome ############################################################ # source data source("read_data.R")