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pdbtools@881ff8f27a
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building script for inspecting pdb
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2020-05-22 11:57:59 +01:00 |
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scratch
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added scratch/
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2020-05-22 12:03:11 +01:00 |
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af_or_calcs.R
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script for calcuating various OR & output csv
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2020-06-23 13:07:29 +01:00 |
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align.py
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added script for pairwise alignment
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2020-05-15 17:58:14 +01:00 |
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chain_extract.py
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script for saving pdb chains in single file
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2020-05-15 13:44:57 +01:00 |
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chain_splitter.py
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added pdb_chain splitter code and wrapper
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2020-05-13 16:54:20 +01:00 |
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combine_afs_ors.py
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combined and output all ors
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2020-06-23 17:34:54 +01:00 |
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combine_dfs.py
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script to combine all ors
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2020-06-19 14:43:23 +01:00 |
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commandArgs-example.r
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getopt and commandArgs examples, and AF/OR update to use getopt()
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2020-06-18 17:59:28 +01:00 |
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data_extraction.py
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ran struc param analysis
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2020-06-17 19:36:02 +01:00 |
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dssp_df.py
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ran struc param analysis
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2020-06-17 19:36:02 +01:00 |
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find_missense.py
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script to combine ors and afs
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2020-06-22 13:07:26 +01:00 |
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getopt-example.r
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getopt and commandArgs examples, and AF/OR update to use getopt()
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2020-06-18 17:59:28 +01:00 |
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kd_df.py
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ran struc param analysis
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2020-06-17 19:36:02 +01:00 |
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nssnp_info_format.py
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added commonly used mutation format for missense muts in the gene_specific nssnp_info file
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2020-06-24 13:34:35 +01:00 |
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or_kinship_link.py
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added commonly used mutation format for missense muts in the gene_specific nssnp_info file
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2020-06-24 13:34:35 +01:00 |
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pdb_align.py
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added script for pairwise alignment
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2020-05-15 17:58:14 +01:00 |
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pdb_chain_extract.py
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tidy up code
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2020-05-15 13:48:50 +01:00 |
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pdb_chain_splitter.py
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tidy up code
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2020-05-15 13:48:50 +01:00 |
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pdbtools_commands
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various debug, doc, and args
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2020-05-25 14:27:25 +01:00 |
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pipeline.ini
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inlcuded the revised master file for 35k isolates
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2020-06-16 11:39:11 +01:00 |
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rd_df.py
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ran struc param analysis
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2020-06-17 19:36:02 +01:00 |
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reference_dict.py
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updated ref dict to create separate dicts
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2020-06-24 14:10:39 +01:00 |
