LSHTM_analysis/scripts/plotting/plotting_thesis/basic_barplots_layout.R

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R

#!/usr/bin/env Rscript
#########################################################
#main script that generates plot objects:
#source("basic_barplots.R")
#########################################################
#=======================================================================
#=======
# output
#=======
outdir_images = paste0("~/git/Writing/thesis/images/results/"
, tolower(gene), "/")
cat("plots will output to:", outdir_images)
df_colname = "duet_outcome"
OutPlot_count = ggplot(df3, aes_string(x = df_colname)) +
geom_bar(aes(fill = eval(parse(text = df_colname)))
, show.legend = TRUE) +
geom_label(stat = "count"
, aes(label = ..count..)
, color = "black"
, show.legend = FALSE
, size = geom_ls)