Tanushree Tunstall 8750e3126a renamed logoP.R --> logoP_or.R		2022-01-26 12:37:08 +00:00
..
redundant	added ed_pfm_data.R function and its corresponding test	2022-01-26 11:55:38 +00:00
tests	renamed logoP.R --> logoP_or.R	2022-01-26 12:37:08 +00:00
aa_prop_bp.R	added first line to all func to run from	2021-06-24 10:02:14 +01:00
bp_lineage.R	replaced old lineage barplot with count and diversity combined plots sourced from function	2021-09-07 09:27:47 +01:00
bp_subcolours.R	saving work and tidying script	2021-09-15 19:37:39 +01:00
combining_dfs_plotting.R	wholesale change for Header_TT.R location	2022-01-26 11:39:03 +00:00
ed_pfm_data.R	added ed_pfm_data.R function and its corresponding test	2022-01-26 11:55:38 +00:00
lf_bp.R	saving minor update to function fix	2021-09-17 13:35:48 +01:00
lf_unpaired_stats.R	added function for stats from lf data	2021-08-27 13:01:52 +01:00
lineage_dist.R	added lineage_dist.R nad renamed lineage_bp_data file to lineage_data	2021-09-09 16:14:14 +01:00
logoP_msa.R	save content	2022-01-26 11:34:59 +00:00
logoP_or.R	renamed logoP.R --> logoP_or.R	2022-01-26 12:37:08 +00:00
logoP_snp.R	finding seq discrepancy in MSA for embb	2022-01-17 19:11:10 +00:00
my_logolas.R	added get_logo_heights() in my_logolas.R	2022-01-26 11:16:02 +00:00
my_pairs_panel.R	fixed pos_count cals in function by specifying dplyr and changed summarize to summarise	2021-09-15 15:46:42 +01:00
myaf_or_calcs.R	added log10 OR and P values to myaf_or_calcs.R	2021-08-23 20:01:01 +01:00
mychisq_or.R	added first line to all func to run from	2021-06-24 10:02:14 +01:00
plotting_data.R	added additional check in combining_df_plotting.R to account for check when generating merged_df2 as muts NOT present in mcsm can create trouble, so fixed that and ran it successfully for alr and katg	2022-01-18 17:36:54 +00:00
plotting_globals.R	going through functions and script for interactive plots	2022-01-12 17:58:16 +00:00
position_count_bp.R	fixed pos_count cals in function by specifying dplyr and changed summarize to summarise	2021-09-15 15:46:42 +01:00
stability_count_bp.R	minor bug fixes to allow i_graps for stability to render correctly	2021-09-16 18:59:02 +01:00