33 lines
783 B
R
33 lines
783 B
R
gene = "alr"
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drug = "cycloserine"
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aa_plip = c(66, 70, 112, 196, 237, 252, 254, 255, 295, 314, 343)
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aa_ligplus = c(66, 64, 70, 112, 196, 236, 237, 252, 253, 254, 255, 388 )
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#active_aa_pos = c(66, 64, 70, 112, 196, 236, 237, 252, 253, 254, 255, 295, 314, 343, 388)
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active_aa_pos = sort(unique(c(aa_plip, aa_ligplus)))
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#aa_plip = c(66 = "hbond"
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#, 70 = "hbond"
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#, 112 = "hydrophobic"
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#, 196 = "hbond"
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#, 237 = "hbond"
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#, 252 = "hbond"
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#, 254 = "hbond"
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#, 255 = "hbond"
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#, 295 = "hbond"
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#, 314 = "hbond"
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#, 343 = "hbond")
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#aa_ligplus = c(66 = "hbond"
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#, 64 = "hydrophobic"
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#, 70 = "hydrophobic"
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#, 112 = "hydrophobic"
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#, 196 = "hbond"
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#, 236 = "hydrophobic"
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#, 237 = "hbond"
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#, 252 = "hydrophobic"
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#, 253 = "hydrophobic"
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#, 254 = "hbond"
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#, 255 = "hbond"
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#, 388 = "hydrophobic"
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#)
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