32 lines
No EOL
774 B
R
32 lines
No EOL
774 B
R
###############################
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# TEST function lineage_dist.R
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# to plot lineage
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# dist plots with or without facet
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##############################
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getwd()
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setwd("~/git/LSHTM_analysis/scripts/plotting/")
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getwd()
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source("Header_TT.R")
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source("get_plotting_dfs.R")
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cat("cols imported:"
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, mcsm_red2, mcsm_red1, mcsm_mid, mcsm_blue1, mcsm_blue2)
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#############################################################
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lineage_distP(lin_dist_plot
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, with_facet = F
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, leg_label = "Mutation Class"
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)
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lineage_distP(lin_dist_plot
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, with_facet = T
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, facet_wrap_var = "mutation_info_labels"
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, leg_label = "Mutation Class"
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, leg_pos_wf = "none"
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, leg_dir_wf = "horizontal"
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) |