#!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Wed Aug 19 14:33:51 2020

@author: tanu
"""
#%% load packages
import os,sys
import subprocess
import argparse
import requests
import re
import time
from bs4 import BeautifulSoup
import pandas as pd
from pandas.api.types import is_string_dtype
from pandas.api.types import is_numeric_dtype
#%%============================================================================
homedir = os.path.expanduser('~')
print(homedir)

my_mutation_list = homedir + '/git/LSHTM_analysis/dynamut/test_input/snp_test2.csv'

text_file = open(my_mutation_list, 'r')
lines = text_file .read().split('\n')
print (lines)
print(len(lines))


def get_results(url_file
                , mutation_list)