############################################################################
# merged_df3 = read.csv("~/git/Data/cycloserine/output/alr_all_params.csv"); source("~/git/LSHTM_analysis/config/alr.R")
# if ( tolower(gene) == "alr") {
#        aa_pos_lig1 =  NULL
#        aa_pos_lig2 =  NULL
#        aa_pos_lig3 =  NULL
#        p_title     = gene
# }

source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")
###########################################################################
# merged_df3 = read.csv("~/git/Data/ethambutol/output/embb_all_params.csv"); source("~/git/LSHTM_analysis/config/embb.R")
# if ( tolower(gene) == "embb") {
#         aa_pos_lig1 = aa_pos_ca
#         aa_pos_lig2 = aa_pos_cdl
#         aa_pos_lig3 = aa_pos_dsl
#         p_title     = gene
# }
source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")

###########################################################################
merged_df3 = read.csv("~/git/Data/streptomycin/output/gid_all_params.csv")

source("~/git/LSHTM_analysis/config/gid.R")
if ( tolower(gene) == "gid") {
         aa_pos_lig1 = aa_pos_rna
         aa_pos_lig2 = aa_pos_sam
         aa_pos_lig3 = aa_pos_amp
         p_title     = gene
}
source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")

###########################################################################
# merged_df3 = read.csv("~/git/Data/isoniazid/output/katg_all_params.csv"); source("~/git/LSHTM_analysis/config/katg.R")
# if ( tolower(gene) == "katg") {
#         aa_pos_lig1 = aa_pos_hem
#         aa_pos_lig2 =  NULL
#         aa_pos_lig3 =  NULL
#         p_title     = gene
# }
source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")

###########################################################################
# merged_df3 = read.csv("~/git/Data/pyrazinamide/output/pnca_all_params.csv"); source("~/git/LSHTM_analysis/config/pnca.R")
# if ( tolower(gene) == "pnca") {
#         aa_pos_lig1 = aa_pos_fe
#         aa_pos_lig2 = NULL
#         aa_pos_lig3 = NULL
#         p_title     = gene
# }
source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")

###########################################################################
merged_df3 = read.csv("~/git/Data/rifampicin/output/rpob_all_params.csv"); source("~/git/LSHTM_analysis/config/rpob.R")
if ( tolower(gene) == "rpob") {
  aa_pos_lig1 = NULL
  aa_pos_lig2 = NULL
  aa_pos_lig3 = NULL
  p_title     = gene
}
source("~/git/LSHTM_analysis/scripts/plotting/get_plotting_dfs.R")

#########################################################################