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b9d173a2c4
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checked combining_dfs.R for all targets
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2022-01-18 17:42:04 +00:00 |
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e2cdee2d08
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added additional check in combining_df_plotting.R to account for check when generating merged_df2 as muts NOT present in mcsm can create trouble, so fixed that and ran it successfully for alr and katg
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2022-01-18 17:36:54 +00:00 |
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8f8a9db92c
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tried ED logo, but needs work
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2022-01-18 16:53:16 +00:00 |
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00094f036a
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playing with MSA plots to allow filtering of positions, arghhh
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2022-01-18 15:30:41 +00:00 |
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4e779b2945
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saving work
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2022-01-18 11:14:25 +00:00 |
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68a092037b
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finding seq discrepancy in MSA for embb
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2022-01-17 19:11:10 +00:00 |
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07aedfe286
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added both test logo plots in one script
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2022-01-16 15:00:54 +00:00 |
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efe6703673
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attempted omitting snp from logo plot for OR
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2022-01-16 14:45:39 +00:00 |
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1244581cdd
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just added some minor tweaks for the logo plots with OR
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2022-01-16 13:31:32 +00:00 |
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9546355241
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updated and tested logoP_snp.R. All done nicely
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2022-01-15 13:17:26 +00:00 |
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0334188801
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adde tests scripts for logoP and logoP_snp.R
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2022-01-14 16:10:49 +00:00 |
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f640087922
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added logoP_snp.R and renamed logo_plots_func.R to logoP.R
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2022-01-14 16:09:57 +00:00 |
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f27b536157
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added option to remove empty positions from logo plot
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2022-01-14 11:07:16 +00:00 |
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4e2f5f35db
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added log option to function properly
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2022-01-14 10:50:56 +00:00 |
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3b7cea3c47
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adding legend forlogo plot
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2022-01-14 10:18:01 +00:00 |
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426a5cb0b5
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added logo_plot function and test to check it
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2022-01-13 18:55:13 +00:00 |
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51aa321792
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sorting out bp_subcolours in interaction
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2021-09-16 12:44:42 +01:00 |
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e8734b1c4b
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sorted merged_df2 and consequently others by position in combining_dfs_plotting.R
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2021-09-16 12:43:36 +01:00 |
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56600ac3f8
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added config/ with drug gene names
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2021-09-16 10:05:28 +01:00 |
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2ac5ec410e
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added test_bp_subcolours.R
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2021-09-15 19:33:52 +01:00 |
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b7d50fbbcd
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added lineage_labels and mutation_info_labels to combinig_dfs_plotting
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2021-09-09 16:10:11 +01:00 |
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03031d2eb6
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moved all test scripts for functions to tests/
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2021-09-09 13:12:07 +01:00 |
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