Commit graph

21 commits

Author SHA1 Message Date
a7d7bceb00 adding options to specify files by user 2020-11-27 13:02:15 +00:00
8dc2fa7326 fixed white space prob with mcsm input with merge 2020-07-14 14:07:23 +01:00
5a2084ba11 remove white space in colnames before mcsm format output 2020-07-14 12:59:40 +01:00
08379c0def minor tidy up in foldx, mcsm and dssp scripts 2020-07-09 14:04:16 +01:00
44597ec563 renamed mcsm_wrapper to run_mcsm 2020-07-09 13:33:56 +01:00
6725f08829 adding default dirs and filenames to argparse in foldx and mcsm 2020-07-09 12:57:08 +01:00
6961a9cdb3 minor edits to format mcsm data like sorting df 2020-07-09 11:15:56 +01:00
8931441fa5 ran foldx and mcsm (get) for 33k dataset 2020-07-08 20:30:32 +01:00
973a1a33da refactor foldx pipeline to include:
* command-line args
* creating necessary dirs automagically
* code cleanup, syntax errors, etc etc
2020-06-30 17:14:30 +01:00
b28d0afded various debug, doc, and args 2020-05-25 14:27:25 +01:00
1d84846789 handle not ready (refresh) url
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2020-04-21 17:12:18 +01:00
8b1a7fc71c moved scripts to /ind_scripts & added add col to formatting script 2020-04-20 12:52:10 +01:00
368496733a fixed indentation error and ran mcsm_wrapper dcs 2020-04-17 12:19:08 +01:00
bc03aab82d add wrapper and mcsm library 2020-04-16 17:45:24 +01:00
23c2ddf45f defined method for formatting mcsm_results 2020-04-14 11:30:36 +01:00
8b7ccccc49 saving work for the day 2020-04-11 19:00:39 +01:00
fb7588cedf added lambda func to normalise duet and aff values 2020-04-11 18:52:57 +01:00
9eb7747065 added script to format results 2020-04-10 19:32:47 +01:00
95147b577c saving work for today 2020-04-09 16:40:45 +01:00
e4df1c5095 adding separae script for getting results for mcsm 2020-04-09 15:42:56 +01:00
41f118223c refactoring bash into python to run mcsm 2020-04-08 18:27:51 +01:00