9bc18169cf
tweaks to thesis figs
2023-02-24 22:38:37 +00:00
db7e2912e1
SNP -> SAV for thesis plots
2023-02-19 17:43:22 +00:00
23bb087ea3
plot function fixes for position tiles
2022-09-06 17:06:01 +01:00
c6f5a446c3
stuff
2022-08-27 15:35:48 +01:00
2e29cf8011
config files
2022-08-15 20:39:59 +01:00
0cc7a8fcae
config: add tile stuff for all targets. Other functions: many rewrites!
2022-08-15 20:39:59 +01:00
6f354ab390
oops!
2022-08-14 12:17:42 +01:00
c8f3ddf892
colour changes
2022-08-13 15:49:24 +01:00
c6a720770d
some stuff
2022-08-13 15:47:41 +01:00
415d05ab6e
various stuff
2022-08-09 19:42:29 +01:00
c968089cd2
refactoring logo plots to add flame bar
2022-08-06 18:48:12 +01:00
bdbc97c40a
fix many plot functions to stop them using the "g=ggplot()" pattern,
...
which annoyingly throws away lots of useful data that RShiny needs for
clickable plots. Also split the "flame bar" for ligand distance out into
separate functions in generate_distance_colour_map.R. This can now be
easily incorporated into any "wide" graph showing all positions.
2022-08-03 18:58:27 +01:00
e498d46f8b
consurf plot: add debug option. logoP SNP: distance flame tiles
2022-08-03 18:58:27 +01:00
4f22cd3db1
various tweaks to make the RShiny dashboards work
2022-04-28 20:21:03 +01:00
ac78fe16cd
logoP SNP adj
2022-03-06 14:48:53 +00:00
2274f01f23
combined msa and wt seq into 1 list so only list is passed as an arg for plotting ED plots
2022-02-15 08:31:58 +00:00
7317156bba
updated docs for the logo functions and tested all of them again
2022-01-26 15:53:53 +00:00
68a092037b
finding seq discrepancy in MSA for embb
2022-01-17 19:11:10 +00:00
efe6703673
attempted omitting snp from logo plot for OR
2022-01-16 14:45:39 +00:00
9546355241
updated and tested logoP_snp.R. All done nicely
2022-01-15 13:17:26 +00:00
f640087922
added logoP_snp.R and renamed logo_plots_func.R to logoP.R
2022-01-14 16:09:57 +00:00
