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added consurf_colours_no_isd to ensure consurf plots are not messed up in the absesnce of 0 categ

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Tanushree Tunstall 2022-09-05 16:01:21 +01:00
parent 2cec743ae0
commit f949592dd8
2 changed files with 17 additions and 1 deletions
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scripts/plotting/plotting_thesis/pnca/basic_barplots_pnca.R
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@ -231,6 +231,9 @@ posC_all = site_snp_count_bp(plotdf = df3
, axis_label_size = axis_label_size)
posC_all
##################################################################
#consurf_colours
consurf_colours_no_isd
consurfP = stability_count_bp(plotdf = df3
, df_colname = "consurf_outcome"
#, leg_title = "ConSurf"
@ -238,7 +241,7 @@ consurfP = stability_count_bp(plotdf = df3
, yaxis_title = "Number of nsSNPs"
, leg_position = "top"
, subtitle_text = "ConSurf"
, bar_fill_values = consurf_colours # from globals
, bar_fill_values = consurf_colours_no_isd # from globals
, subtitle_colour= "black"
, sts = sts
, lts = lts