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added corr plot TODO for lineage counts

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Tanushree Tunstall 2022-08-06 13:30:41 +01:00
parent 0e777108a9
commit f194b5ea4f
2 changed files with 30 additions and 7 deletions
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9
scripts/functions/corr_plot_data.R
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@ -18,9 +18,12 @@
# RETURNS: DF
# containing all the columns required for generating downstream correlation plots
# TO DO: SHINY
#1) Corr type?
#2)
# TODO: ADD
#lineage_count_all
#lineage_count_unique
#my_df['lineage_proportion'] = my_df['lineage_count_unique']/my_df['lineage_count_all']
#my_df['dist_lineage_proportion'] = my_df['lineage_count_unique']/total_mtblineage_uc
##################################################################
# LigDist_colname #from globals: plotting_globals.R
# ppi2Dist_colname #from globals: plotting_globals.R