tanu/LSHTM_analysis
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Tanushree Tunstall 2022-06-24 15:43:00 +01:00
parent 1160ad7268
commit edb7aebd6a
1 changed files with 6 additions and 6 deletions
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scripts/ml/run_7030.py Normal file → Executable file
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@ -15,13 +15,13 @@ import os, sys
#total_mtblineage_uc = 8
###############################################################################
#%% command line args: case sensitive
# arg_parser = argparse.ArgumentParser()
# arg_parser.add_argument('-d', '--drug', help = 'drug name', default = '')
# arg_parser.add_argument('-g', '--gene', help = 'gene name', default = '')
# args = arg_parser.parse_args()
arg_parser = argparse.ArgumentParser()
arg_parser.add_argument('-d', '--drug', help = 'drug name', default = '')
arg_parser.add_argument('-g', '--gene', help = 'gene name', default = '')
args = arg_parser.parse_args()
# drug = args.drug
# gene = args.gene
drug = args.drug
gene = args.gene
###############################################################################
homedir = os.path.expanduser("~")