From e9a95e9d3afe6b7b4edfee35239ca736e094df3c Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Tue, 25 Feb 2020 10:42:58 +0000 Subject: [PATCH] hydrophobicity script --- meta_data_analysis/kd.py | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/meta_data_analysis/kd.py b/meta_data_analysis/kd.py index 0081eef..a986175 100644 --- a/meta_data_analysis/kd.py +++ b/meta_data_analysis/kd.py @@ -18,11 +18,11 @@ import pandas as pd import numpy as np import sys, os #%% -# specify variables +# specify input and output variables +homedir = os.path.expanduser('~') #======= # input #======= -homedir = os.path.expanduser('~') indir = 'git/Data/pyrazinamide/input/original' in_filename = "3pl1.fasta.txt" infile = homedir + '/' + indir + '/' + in_filename