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added colors for tiles for gid plots and appendix tables

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Tanushree Tunstall 2022-08-25 17:50:49 +01:00
parent ac72634b48
commit e4e8bd7278
3 changed files with 273 additions and 42 deletions
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14
config/gid.R
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@ -129,15 +129,15 @@ cat("\n==================================================="
##############################################################
# var for position customisation for plots
aa_pos_drug
aa_pos_lig1 = aa_pos_sam
aa_pos_lig2 = aa_pos_rna
aa_pos_lig3 = aa_pos_amp
aa_pos_drug = c(0) #00ff00 # green # as STR doesn't bind
aa_pos_lig1 = aa_pos_sam #2f4f4f # darkslategrey
aa_pos_lig2 = aa_pos_rna #ff1493 #deeppink
aa_pos_lig3 = aa_pos_amp #000080 #navyblue
tile_map=data.frame(tile=c("SRY","SAM","RNA","AMP"),
tile_colour=c("green","darkslategrey","darkred","navyblue"))
tile_map=data.frame(tile=c("STR","SAM","RNA","AMP"),
tile_colour=c("#00ff00","#2f4f4f","#ff1493","#000080"))
# green: #00ff00
# darkslategrey : #2f4f4f
# darkred : #8b0000
# deeppink : #ff1493
# navyblue :#000080