From dd69da01f6aafbb99981c076d34ad49923d92ef8 Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Tue, 23 Aug 2022 15:19:36 +0100 Subject: [PATCH] get_plotting_dfs --- scripts/plotting/get_plotting_dfs.R | 18 +++++++----------- 1 file changed, 7 insertions(+), 11 deletions(-) diff --git a/scripts/plotting/get_plotting_dfs.R b/scripts/plotting/get_plotting_dfs.R index fb52fd1..91adf2b 100644 --- a/scripts/plotting/get_plotting_dfs.R +++ b/scripts/plotting/get_plotting_dfs.R @@ -197,8 +197,8 @@ cat(s2) # # My function: lineage_plot_data() # # location: scripts/functions/lineage_plot_data.R # #################################################################### -# -source(paste0(plot_script_path, "lineage_data.R")) +# +#source(paste0(plot_script_path, "lineage_data.R")) # # converted to a function. Moved lineage_data.R to redundant/ lineage_dfL = lineage_plot_data(merged_df2 , lineage_column_name = "lineage" @@ -220,22 +220,18 @@ cat(s3) # location: scripts/functions/corr_plot_data.R #################################################################### # make sure the above script works because merged_df2_combined is needed -merged_df3 = as.data.frame(merged_df3) +# 1 +# s3 = c("\nSuccessfully sourced lineage_data.R") +# cat(s3) + merged_df3 = as.data.frame(merged_df3) +# corr_df_m3_f = corr_data_extract(merged_df3 , gene = gene , drug = drug , extract_scaled_cols = F) head(corr_df_m3_f) -======= -# -# corr_df_m2_f = corr_data_extract(merged_df2 -# , gene = gene -# , drug = drug -# , extract_scaled_cols = F) -# head(corr_df_m2_f) - s4 = c("\nSuccessfully sourced Corr_data.R") cat(s4)