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SNP -> SAV for thesis plots

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This commit is contained in:
Tanushree Tunstall 2023-02-19 17:43:22 +00:00
parent 777d3765cf
commit db7e2912e1
31 changed files with 145 additions and 145 deletions
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6
scripts/functions/tests/test_bp_lineage.R
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@ -4,7 +4,7 @@ source ('get_plotting_dfs.R')
source("../functions/bp_lineage.R")
#########################################
# Lineage and SNP count: lineage lf data
# Lineage and SAV count: lineage lf data
#########################################
#=========================
# Data: All lineages or
@ -35,7 +35,7 @@ lin_count_bp(lin_lf_plot = lin_lf
, y_label = "Count")
###############################################
# Lineage SNP diversity count: lineage wf data
# Lineage SAV diversity count: lineage wf data
###############################################
#=========================
# Data: All lineages or
@ -59,4 +59,4 @@ lin_count_bp(lin_wf_plot = lin_wf
, x_lab_angle = 90
, my_xats = 20
, y_scale_percent = T
, y_label = "SNP diversity")
, y_label = "SAV diversity")