minor tweak to plotting_globals.R to make gene_match a global var

This commit is contained in:
Tanushree Tunstall 2021-06-11 11:21:20 +01:00
parent 29fa99b914
commit d9e00b9a42
2 changed files with 9 additions and 10 deletions

View file

@ -8,7 +8,6 @@
setwd("~/git/LSHTM_analysis/scripts/plotting")
getwd()
# load libraries
#source("Header_TT.R")
library(ggplot2)
@ -88,14 +87,15 @@ my_df_u_lig = pd_df[[3]]
dup_muts = pd_df[[4]]
cat(paste0("Directories imported:"
, "\ndatadir:", datadir
, "\nindir:", indir
, "\noutdir:", outdir
, "\nplotdir:", plotdir))
, "\ndatadir:" , datadir
, "\nindir:" , indir
, "\noutdir:" , outdir
, "\nplotdir:" , plotdir))
cat(paste0("\nVariables imported:"
, "\ndrug:", drug
, "\ngene:", gene
, "\ndrug:" , drug
, "\ngene:" , gene
, "\ngene match:" , gene_match
, "\n"))
#=======================================================================
#=======