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saving work for the day after massive repurpose

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Tanushree Tunstall 2021-09-15 19:48:56 +01:00
parent c06b0eb696
commit d63980bb01
1 changed files with 3 additions and 8 deletions
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11
scripts/plotting/get_plotting_dfs.R
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@ -1,26 +1,21 @@
#!/usr/bin/env Rscript #!/usr/bin/env Rscript
######################################################### #########################################################
# TASK: Get formatted data for plots # TASK: Get formatted data for plots
#======================================================================= #########################################################
# working dir and loading libraries # working dir and loading libraries
getwd() getwd()
setwd("~/git/LSHTM_analysis/scripts/plotting") setwd("~/git/LSHTM_analysis/scripts/plotting")
getwd() getwd()
source("Header_TT.R") source("Header_TT.R")
# source("../functions/my_pairs_panel.R") # with lower panel turned off
# source("../functions/plotting_globals.R")
# source("../functions/plotting_data.R")
# source("../functions/combining_dfs_plotting.R")
# source("../functions/bp_subcolours.R")
#******************** #********************
# cmd args passed # cmd args passed
# in from other scripts # in from other scripts
# to call this # to call this
#******************** #********************
#drug = 'streptomycin'
#gene = 'gid'
#==================== #====================
# variables for lig # variables for lig
#==================== #====================