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updated ref dict to create separate dicts

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Tanushree Tunstall 2020-06-24 14:10:39 +01:00
parent 27a656dba1
commit cdb1ea1476
1 changed files with 0 additions and 12 deletions
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scripts/reference_dict.py
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@ -45,17 +45,6 @@ print('Input filename:', in_filename
, '\nInput path:', datadir
, '\n============================================================')
#=======
# output: No output
#=======
#outdir = datadir + '/' + drug + '/' + 'output'
#out_filename = ''
#outfile = outdir + '/' + out_filename
#print('Output filename:', out_filename
# , '\nOutput path:', outdir)
#%% end of variable assignment for input and output files
#=======================================================================
#%% Read input file
aa_table = pd.read_csv(infile) #20, 6
@ -116,7 +105,6 @@ print('Printing upper case 3 letter aa dict:', up_3letter_aa_dict.keys())
#================================================
# dict of aa with their corresponding properties
# This is defined twice
#================================================
# 7 categories: no overlap
qualities1 = { ('R', 'H', 'K'): 'Basic'