tanu/LSHTM_analysis
1
0
Fork 0
Code Issues Pull requests Releases Wiki Activity

tidy script for data extraction

Browse source
This commit is contained in:
Tanushree Tunstall 2020-01-28 11:53:10 +00:00
parent 366bb3960d
commit c10d54f104
1 changed files with 1 additions and 1 deletions
Download patch file Download diff file Expand all files Collapse all files

2
meta_data_analysis/pnca_data_extraction.py
View file

@ -308,7 +308,7 @@ else:
# count if all the mutations are indeed in the protein coding region # count if all the mutations are indeed in the protein coding region
# i.e begin with pnca_p # i.e begin with pnca_p
meta_pnca_LF1['mutation'].str.count('pncA_p.').sum() # 3093 meta_pnca_LF1['mutation'].str.count('pncA_p.').sum()
# should be true. # should be true.
# and check against the length of the df, which should match # and check against the length of the df, which should match