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adde format_results_dynamut2.py and ran shiny scripts for barplots

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Tanushree Tunstall 2021-08-19 16:25:38 +01:00
parent 9cb33ed67b
commit c0c30fd527
9 changed files with 235 additions and 59 deletions
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19
dynamut/run_get_results_dynamut.py
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@ -24,20 +24,9 @@ indir = datadir + drug + '/input/'
outdir = datadir + drug + '/output/'
outdir_dynamut_temp = outdir + 'dynamut_results/dynamut_temp/'
#==============================================================================
# batch 8: 08.txt, # RETRIEVED 23 Feb 08:54
#my_url_file = outdir + '/dynamut_temp/dynamut_result_url_gid_b8.txt'
#my_suffix = 'gid_b7'
#b09 and b10 failed, ran by Carlos, and returned results on 12 Aug
# batch 9 and 10: RETRIEVED 12 Aug 09:25
#my_url_file = outdir_dynamut_temp + 'dynamut_result_url_gid_b10.txt'
#my_suffix = 'gid_b10'
# batch10_21: from bissection: humour me! (don't need since b10 ran
# from dynamut team, but still its ready to extract it!) RETRIEVED 12 Aug 17:37
my_url_file = outdir_dynamut_temp + 'dynamut_result_url_gid_b10_21.txt'
my_suffix = 'gid_b10_21'
# batch 7 (previously 1b file): RETRIEVED 17 Aug 16:40
my_url_file = outdir_dynamut_temp + 'dynamut_result_url_gid_b7.txt'
my_suffix = 'gid_b7'
#==============================================================================
#==========================
@ -52,4 +41,4 @@ get_results(url_file = my_url_file
, output_dir = outdir
, outfile_suffix = my_suffix)
########################################################################
########################################################################