From b82cc11dbeefbe54c6ca73762740bfa4ecaa2866 Mon Sep 17 00:00:00 2001 From: Tanushree Tunstall Date: Wed, 24 Jun 2020 14:10:39 +0100 Subject: [PATCH] updated ref dict to create separate dicts --- scripts/reference_dict.py | 12 ------------ 1 file changed, 12 deletions(-) diff --git a/scripts/reference_dict.py b/scripts/reference_dict.py index 6e7c0e8..d012898 100644 --- a/scripts/reference_dict.py +++ b/scripts/reference_dict.py @@ -45,17 +45,6 @@ print('Input filename:', in_filename , '\nInput path:', datadir , '\n============================================================') -#======= -# output: No output -#======= -#outdir = datadir + '/' + drug + '/' + 'output' -#out_filename = '' -#outfile = outdir + '/' + out_filename -#print('Output filename:', out_filename -# , '\nOutput path:', outdir) - -#%% end of variable assignment for input and output files -#======================================================================= #%% Read input file aa_table = pd.read_csv(infile) #20, 6 @@ -116,7 +105,6 @@ print('Printing upper case 3 letter aa dict:', up_3letter_aa_dict.keys()) #================================================ # dict of aa with their corresponding properties -# This is defined twice #================================================ # 7 categories: no overlap qualities1 = { ('R', 'H', 'K'): 'Basic'