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added cm run for logo_skf for actual data

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Tanushree Tunstall 2022-07-02 16:57:11 +01:00
parent 9071a87056
commit b2d0b827ad
4 changed files with 56 additions and 124 deletions
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8
scripts/ml/ml_functions/ml_data_combined.py
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@ -71,4 +71,12 @@ else:
omit_gene_alr = ['alr']
cm_input_df5 = combined_df[~combined_df['gene_name'].isin(omit_gene_alr)]
#%% COMPLETE data
combined_df['dst'].isna().sum()
combined_df['dst'].value_counts().sum()
combined_df_actual = combined_df[~combined_df['dst'].isna()]
##############################################################################