tanu/LSHTM_analysis
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various debug, doc, and args

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Tanushree Tunstall 2020-05-25 14:27:25 +01:00
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@ -10,7 +10,7 @@ Requires an additional 'Data' directory. Batteries not included:-)
## Assumptions
1. git repos are cloned to `~/git`
2. Requires a `Data/` in `~/git` which has the struc created by `mk_drug_dirs.sh`
2. Requires a data directory with an `input` and `output` subdirs. Can be specified on the CLI with `--datadir`, and optionally can be created with `mk_drug_dirs.sh <DRUG_NAME>`
## LSHTM\_analysis: