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Tanushree Tunstall 2022-01-26 11:34:59 +00:00
parent 1c1e98ad4f
commit b133b8be24
4 changed files with 5 additions and 20 deletions
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4
scripts/functions/logoP_msa.R
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@ -1,7 +1,5 @@
source("~/git/LSHTM_analysis/scripts/plotting/Header_TT.R")
source("~/git/LSHTM_analysis/scripts/functions/ed_pfm_data.R")
###########################################
PlotLogolasMSA <- function(msaSeq_mut # chr vector
LogoPlotMSA <- function(msaSeq_mut # chr vector
, msaSeq_wt # chr vector
#, msa_method = c("custom") # can be "bits", "probability" or "custom"
, logo_type = c("EDLogo") #"bits_pfm", "probability_pfm", "bits_raw", "probability_raw") # can be "bits", "probability" or "custom"